RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 C8orf58Q8NAV2 365 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 VPS37AQ8NEZ2 397 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 TMEM41AQ96HV5 264 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 C5orf34Q96MH7 638 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 HS6ST2Q96MM7 605 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 TAGLN3Q9UI15 199 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 H3BNC9 293 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 M0QZQ0 153 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 CLIC1O00299 241 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 HNRNPDLO14979 420 aaKnown RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 SETSIPP0DME0 302 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 TMIGD3P0DMS9 266 aaPredicted RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 TECP42680 631 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 SLC14A1Q13336 389 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 KCNB1Q14721 858 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 SEC23BQ15437 767 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 RASGRP3Q8IV61 690 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 SPICE1Q8N0Z3 855 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 ADAMTS18Q8TE60 1221 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 FYTTD1Q96QD9 318 aaKnown RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 CRB3Q9BUF7 120 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 EFHD1Q9BUP0 239 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
SSB-209ENST00000470621 FZD4Q9ULV1 537 aa6.36□□□□□ -1.39
SSB-209ENST00000470621 A0A087WV62 115 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 BTBD19C9JJ37 291 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 UBE2Q2LH0YL09 131 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 USP1O94782 785 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 CHRM5P08912 532 aaPredicted RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 EPHB2P29323 1055 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 SRSF4Q08170 494 aaKnown RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 CCDC15Q0P6D6 951 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 HNRNPA0Q13151 305 aaKnown RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 CERKLQ49MI3 558 aaPredicted RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 MSANTD2Q6P1R3 559 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 GGT6Q6P531 493 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 SRRM1Q8IYB3 904 aaKnown RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 CLASRPQ8N2M8 674 aaKnown RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 FAM71DQ8N9W8 422 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 NGDNQ8NEJ9 315 aaKnown RBP6.35□□□□□ -1.39
SSB-209ENST00000470621 STYXQ8WUJ0 223 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 FLRT1Q9NZU1 646 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 KLHL13Q9P2N7 655 aa6.35□□□□□ -1.39
SSB-209ENST00000470621 ASNA1O43681 348 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 TAF5LO75529 589 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 CELA2AP08217 269 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 KLRK1P26718 216 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 DGKQP52824 942 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 GALNT1Q10472 559 aaPredicted RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 GRM4Q14833 912 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 P3H1Q32P28 736 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 C1orf228Q6PIY5 440 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 SAMD3Q8N6K7 520 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 CINPQ9BW66 212 aaPredicted RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 QTRT1Q9BXR0 403 aaKnown RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 WDR26Q9H7D7 661 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 PLCB1Q9NQ66 1216 aa6.34□□□□□ -1.39
SSB-209ENST00000470621 GAR1Q9NY12 217 aaKnown RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 MAGED2Q9UNF1 606 aaPredicted RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 SCAF8Q9UPN6 1271 aaKnown RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 SETD1BQ9UPS6 1966 aaKnown RBP6.34□□□□□ -1.39
SSB-209ENST00000470621 CCDC187A0A096LP49 1063 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 C16orf96A6NNT2 1141 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 TMEM232C9JQI7 657 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 CTIFO43310 598 aaKnown RBP6.33□□□□□ -1.4
SSB-209ENST00000470621 ITGA5P08648 1049 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 PDIA3P30101 505 aaKnown RBP6.33□□□□□ -1.4
SSB-209ENST00000470621 WDR5P61964 334 aaKnown RBP6.33□□□□□ -1.4
SSB-209ENST00000470621 TNFAIP2Q03169 654 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 GAB1Q13480 694 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 SUPT20HL1Q3ZLR7 823 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 ARL6IP4Q66PJ3 421 aaKnown RBP6.33□□□□□ -1.4
SSB-209ENST00000470621 TLDC1Q6P9B6 456 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 VOPP1Q96AW1 172 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 PRPF18Q99633 342 aaKnown RBP6.33□□□□□ -1.4
SSB-209ENST00000470621 ABHD10Q9NUJ1 306 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 SEMA5BQ9P283 1151 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 CA14Q9ULX7 337 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 LRCH1Q9Y2L9 728 aa6.33□□□□□ -1.4
SSB-209ENST00000470621 PNMA6EA0A0J9YXQ4 647 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 LGALS16A8MUM7 142 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 FFAR2O15552 330 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 NTSR2O95665 410 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 GLP2RO95838 553 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 ANXA6P08133 673 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 NPPBP16860 134 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 SFPQP23246 707 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSB-209ENST00000470621 IGHMBP2P38935 993 aaKnown RBP6.32□□□□□ -1.4
SSB-209ENST00000470621 ARHGAP25P42331 645 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 GSTM5P46439 218 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 SEMA3BQ13214 749 aa6.32□□□□□ -1.4
SSB-209ENST00000470621 KPNB1Q14974 876 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms