RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NME3Q13232 169 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 CAMK1Q14012 370 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 TAF12Q16514 161 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 DPYSL2Q16555 572 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 SMTNL2Q2TAL5 461 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 ARL13BQ3SXY8 428 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 KCNT1Q5JUK3 1230 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 BRMS1LQ5PSV4 323 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 PLPP4Q5VZY2 271 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 AADACL2Q6P093 401 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 DNAJB7Q7Z6W7 309 aaPredicted RBP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 TAC4Q86UU9 113 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 KREMEN2Q8NCW0 462 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 LRRN4CLQ8ND94 238 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 MICAL1Q8TDZ2 1067 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 HSPH1Q92598 858 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 PSMG2Q969U7 264 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 SNRNP25Q9BV90 132 aaKnown RBP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 PBX4Q9BYU1 374 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 OSER1Q9NX31 292 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 SMARCAL1Q9NZC9 954 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 RCOR3Q9P2K3 495 aaPredicted RBP15.74■□□□□ 0.11
COL4A5-203ENST00000470339 OBSL1O75147 1896 aa15.74■□□□□ 0.11
COL4A5-203ENST00000470339 hCG_1818297A0A087WSY0 165 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 PI4K2BG5E9Z4 385 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 IRAK2O43187 625 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 SLC2A3P11169 496 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 RARGP13631 454 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 L1CAMP32004 1257 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 TUBP50607 506 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 CLCN4P51793 760 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 KPNA1P52294 538 aaPredicted RBP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 ATXN1P54253 815 aaKnown RBP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 CDH6P55285 790 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 MTA1Q13330 715 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 PPP2R5DQ14738 602 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 PABPC1LQ4VXU2 614 aaKnown RBP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 GLE1Q53GS7 698 aaKnown RBP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 PRPF38BQ5VTL8 546 aaKnown RBP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 CCDC70Q6NSX1 233 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 KLHDC10Q6PID8 442 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 FAM131BQ86XD5 332 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 STKLD1Q8NE28 680 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 ZNF670Q9BS34 389 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 WDCPQ9H6R7 721 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL4A5-203ENST00000470339 DPP7Q9UHL4 492 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 AP4E1Q9UPM8 1137 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 TLR6Q9Y2C9 796 aa15.73■□□□□ 0.11
COL4A5-203ENST00000470339 ATG2AQ2TAZ0 1938 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 ZNF840PA6NDX5 716 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 PBX2P40425 430 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 C2orf54Q08AI8 447 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 TFDP2Q14188 446 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 KRT81Q14533 505 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 SIX1Q15475 284 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 EFHC2Q5JST6 749 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 BBS12Q6ZW61 710 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 SPRED2Q7Z698 418 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 C12orf50Q8NA57 414 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 NOA1Q8NC60 698 aaKnown RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 ADAM32Q8TC27 787 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 TSC1Q92574 1164 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 CASP10Q92851 521 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 ACSF2Q96CM8 615 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 FAF2Q96CS3 445 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 RUNDC3BQ96NL0 473 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 HAPLN3Q96S86 360 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 AP1M1Q9BXS5 423 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 MAK16Q9BXY0 300 aaKnown RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 FRMD8P1Q9BZ68 369 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 SLITRK6Q9H5Y7 841 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 PCDH18Q9HCL0 1135 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 KLHL11Q9NVR0 708 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 ARHGEF38Q9NXL2 777 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
COL4A5-203ENST00000470339 MAGED2Q9UNF1 606 aaPredicted RBP15.72■□□□□ 0.11
COL4A5-203ENST00000470339 TRANK1O15050 2925 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 CLASP2O75122 1294 aaKnown RBP15.71■□□□□ 0.11
COL4A5-203ENST00000470339 LRG1P02750 347 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 C8AP07357 584 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 IL4RP24394 825 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 HOXA9P31269 272 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 CCR1P32246 355 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 CHRNA3P32297 505 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 HCAR3P49019 387 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 RING1Q06587 406 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 CCNG2Q16589 344 aa15.71■□□□□ 0.11
COL4A5-203ENST00000470339 ZC3H12AQ5D1E8 599 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms