RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PNOCQ13519 176 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 ST3GAL2Q16842 350 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 COBLL1Q53SF7 1204 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 RAB41Q5JT25 222 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 PEAR1Q5VY43 1037 aaPredicted RBP18.36■□□□□ 0.53
COL7A1-208ENST00000470076 SLC23A3Q6PIS1 610 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 PIGZQ86VD9 579 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 ANKRD52Q8NB46 1076 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 IPO4Q8TEX9 1081 aaKnown RBP18.36■□□□□ 0.53
COL7A1-208ENST00000470076 ACOX2Q99424 681 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 TSG101Q99816 390 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 ARID3AQ99856 593 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 CD248Q9HCU0 757 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 TMEM74BQ9NUR3 256 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 RASAL2Q9UJF2 1139 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 FBXO10Q9UK96 956 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 PILRBQ9UKJ0 227 aa18.36■□□□□ 0.53
COL7A1-208ENST00000470076 SLC16A3O15427 465 aaKnown RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 PENKP01210 267 aaPredicted RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 KLKB1P03952 638 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 CSRP1P21291 193 aaKnown RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 PRCPP42785 496 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 FKBP3Q00688 224 aaKnown RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 EFEMP1Q12805 493 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 SH3PXD2AQ5TCZ1 1133 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 ZNF658Q5TYW1 1059 aaPredicted RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 TCERG1LQ5VWI1 586 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 FMR1NBQ8N0W7 255 aaPredicted RBP18.35■□□□□ 0.53
COL7A1-208ENST00000470076 TATDN2Q93075 761 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 BHMTQ93088 406 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 GSDMAQ96QA5 445 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 PLK2Q9NYY3 685 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 STRIP2Q9ULQ0 834 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 SLC27A6Q9Y2P4 619 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 COQ4Q9Y3A0 265 aa18.35■□□□□ 0.53
COL7A1-208ENST00000470076 IGHV1OR15-9A0A0B4J2B8 117 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CEACAM1P13688 526 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 NDUFV2P19404 249 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 ITPKAP23677 461 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CBWD6Q4V339 395 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 DCAF17Q5H9S7 520 aaPredicted RBP18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CBWD3Q5JTY5 395 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CBWD5Q5RIA9 395 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 KIAA1211LQ6NV74 962 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 RSRC2Q7L4I2 434 aaKnown RBP18.34■□□□□ 0.53
COL7A1-208ENST00000470076 RABEPKQ7Z6M1 372 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 ZC3H3Q8IXZ2 948 aaKnown RBP18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 GTPBP4Q9BZE4 634 aaKnown RBP18.34■□□□□ 0.53
COL7A1-208ENST00000470076 CACNA2D2Q9NY47 1150 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
COL7A1-208ENST00000470076 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 GIPC1O14908 333 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 NPC1O15118 1278 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 SMC2O95347 1197 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 ZBED1O96006 694 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 ENGP17813 658 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 CORO1AP31146 461 aaKnown RBP18.33■□□□□ 0.52
COL7A1-208ENST00000470076 TKTL1P51854 596 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL7A1-208ENST00000470076 YWHAEP62258 255 aaKnown RBP18.33■□□□□ 0.52
COL7A1-208ENST00000470076 ZNF33AQ06730 810 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 CUL2Q13617 745 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 E2F5Q15329 346 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 DUOXA1Q1HG43 343 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 UAP1L1Q3KQV9 507 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 FYB2Q5VWT5 728 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 PM20D1Q6GTS8 502 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 AGO1Q9UL18 857 aaKnown RBP18.33■□□□□ 0.52
COL7A1-208ENST00000470076 SLC6A14Q9UN76 642 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 FRYQ5TBA9 3013 aa18.33■□□□□ 0.52
COL7A1-208ENST00000470076 ATXN2Q99700 1313 aaKnown RBP18.32■□□□□ 0.52
COL7A1-208ENST00000470076 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
COL7A1-208ENST00000470076 KRT37O76014 449 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 CYBBP04839 570 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 CFIP05156 583 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 HMBSP08397 361 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 ZNF132P52740 706 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 BCAT1P54687 386 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 MFAP3P55082 362 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 LRRC63Q05C16 580 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 ZNF252P-AS1Q0IIN9 211 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 STARD3Q14849 445 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 GOLGA7BQ2TAP0 167 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 SGO2Q562F6 1265 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 ANKRD40Q6AI12 368 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 DENND1CQ8IV53 801 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 CPXM2Q8N436 756 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 SPATA20Q8TB22 786 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 UCMAQ8WVF2 138 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 PLD4Q96BZ4 506 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 P2RY11Q96G91 374 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 MRGPRX1Q96LB2 322 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 OLA1Q9NTK5 396 aaKnown RBP18.32■□□□□ 0.52
COL7A1-208ENST00000470076 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 ARMCX3Q9UH62 379 aaPredicted RBP18.32■□□□□ 0.52
COL7A1-208ENST00000470076 TSPAN16Q9UKR8 245 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 CYP8B1Q9UNU6 501 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 RAD54BQ9Y620 910 aa18.32■□□□□ 0.52
COL7A1-208ENST00000470076 STON1Q9Y6Q2 735 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms