RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RIPK1Q13546 671 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 BMPR2Q13873 1038 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 SNX17Q15036 470 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 PREPLQ4J6C6 727 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-205ENST00000469687 SLC45A4Q5BKX6 768 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 NCBP2-AS2Q69YL0 99 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 IQSEC1Q6DN90 963 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 ZNF449Q6P9G9 518 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 UNC5AQ6ZN44 842 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 NLRP9Q7RTR0 991 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 PLEKHH3Q7Z736 793 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 ZDHHC17Q8IUH5 632 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 MAGEC3Q8TD91 643 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 VPS11Q9H270 941 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 PNPLA8Q9NP80 782 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 DTLQ9NZJ0 730 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 NRCAMQ92823 1304 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 MBLAC1A4D2B0 266 aaPredicted RBP15.21■□□□□ 0.02
CBWD3-205ENST00000469687 BEST1O76090 585 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 CSH1P0DML2 217 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 CSH2P0DML3 217 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 ALADP13716 330 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 BGNP21810 368 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 MAGEA6P43360 314 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 RABGGTBP53611 331 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 TAF1BQ53T94 588 aaPredicted RBP15.21■□□□□ 0.02
CBWD3-205ENST00000469687 UBXN11Q5T124 520 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 SLC26A11Q86WA9 606 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 OSTM1Q86WC4 334 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 CRYBG2Q8N1P7 616 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 PIH1D1Q9NWS0 290 aaKnown RBP15.21■□□□□ 0.02
CBWD3-205ENST00000469687 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.02
CBWD3-205ENST00000469687 SYNJ2BP-COX16A0A087WUM0 186 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 SMIM35A0A1B0GVV1 85 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 SPAG6O75602 509 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 ACAT1P24752 427 aaKnown RBP15.2■□□□□ 0.02
CBWD3-205ENST00000469687 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
CBWD3-205ENST00000469687 MAGEA3P43357 314 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 RPL34P49207 117 aaKnown RBP15.2■□□□□ 0.02
CBWD3-205ENST00000469687 ADIGQ0VDE8 80 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 ACCSLQ4AC99 568 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 WLSQ5T9L3 541 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
CBWD3-205ENST00000469687 DEFB106AQ8N104 65 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 SIGLEC10Q96LC7 697 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 LGMNQ99538 433 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 MECRQ9BV79 373 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 COX16Q9P0S2 106 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 GNEQ9Y223 722 aaKnown RBP15.2■□□□□ 0.02
CBWD3-205ENST00000469687 MAD1L1Q9Y6D9 718 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 USP3Q9Y6I4 520 aa15.2■□□□□ 0.02
CBWD3-205ENST00000469687 A0A0G2JND7 137 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 DCTN3O75935 186 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 DESP17661 470 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 PRKCHP24723 683 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 OTUD1Q5VV17 481 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 MTDHQ86UE4 582 aaKnown RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 PIGZQ86VD9 579 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 UNC5BQ8IZJ1 945 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 APPL2Q8NEU8 664 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 STAMBPL1Q96FJ0 436 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 SRPK1Q96SB4 655 aaKnown RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 CEP41Q9BYV8 373 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 TXLNGQ9NUQ3 528 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 C2CD2LO14523 706 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 GCATO75600 419 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 APOEP02649 317 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 ALDH3A1P30838 453 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 NDUFV1P49821 464 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 TAF6P49848 677 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 ADAM17P78536 824 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 CRADDP78560 199 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 MRPS5P82675 430 aaKnown RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 MFSD10Q14728 455 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 TLK2Q86UE8 772 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 ADGRF2Q8IZF7 708 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 PRR11Q96HE9 360 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 QKIQ96PU8 341 aaKnown RBP eCLIP15.19■□□□□ 0.02
CBWD3-205ENST00000469687 GDAP2Q9NXN4 497 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 SLC17A6Q9P2U8 582 aa15.19■□□□□ 0.02
CBWD3-205ENST00000469687 HMX2A2RU54 273 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 GLTPD2A6NH11 291 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF487B1APH4 448 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 MFSD11O43934 449 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms