RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 RAB3IPQ96QF0 476 aaPredicted RBP6.24□□□□□ -1.41
SHQ1-205ENST00000468371 ERGIC2Q96RQ1 377 aa6.24□□□□□ -1.41
SHQ1-205ENST00000468371 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
SHQ1-205ENST00000468371 PAAF1Q9BRP4 392 aa6.24□□□□□ -1.41
SHQ1-205ENST00000468371 WDR6Q9NNW5 1121 aaKnown RBP6.24□□□□□ -1.41
SHQ1-205ENST00000468371 PRM3Q9NNZ6 103 aa6.24□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF236Q9UL36 1845 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 GRID2IPA4D2P6 1211 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 LRRC10BA6NIK2 292 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CCT8L1PA6NM43 557 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TISP43B9A030 160 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 BNIP3LO60238 219 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TBX10O75333 385 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 FERP16591 822 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 PSMC3P17980 439 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 PBX1P40424 430 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 MYL6P60660 151 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SFSWAPQ12872 951 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 IL17AQ16552 155 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 UPP1Q16831 310 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 C6orf118Q5T5N4 469 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SDHAF4Q5VUM1 108 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ANKRD20A3Q5VUR7 823 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 GJB7Q6PEY0 223 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CROCCP2Q86T23 111 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TMEM173Q86WV6 379 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 LRRC34Q8IZ02 419 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 RGL4Q8IZJ4 473 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SPATA20Q8TB22 786 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 BPIFB1Q8TDL5 484 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 DEPDC1BQ8WUY9 529 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TRIM62Q9BVG3 475 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 VCXQ9H320 206 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 KCNK12Q9HB15 430 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 DMAP1Q9NPF5 467 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 FGFR1OP2Q9NVK5 253 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CNTN3Q9P232 1028 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 FARP1Q9Y4F1 1045 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SCN10AQ9Y5Y9 1956 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 BMP1P13497 986 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 PTPN1P18031 435 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 MSH2P43246 934 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 RECQLP46063 649 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 KCNJ1P48048 391 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 PTPN5P54829 565 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 NOP14P78316 857 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CYP24A1Q07973 514 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TEAD2Q15562 447 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 NAB2Q15742 525 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 LONRF1Q17RB8 773 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 HECTD3Q5T447 861 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TMEM270Q6UE05 265 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 VSTM1Q6UX27 236 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 RFX8Q6ZV50 586 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TOP6BLQ8N6T0 577 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CELF5Q8N6W0 485 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SMRP1Q8NCR6 262 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 STAMBPL1Q96FJ0 436 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 GBP5Q96PP8 586 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 PITPNM3Q9BZ71 974 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 UBXN6Q9BZV1 441 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 NIF3L1Q9GZT8 377 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TASP1Q9H6P5 420 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 UBE2TQ9NPD8 197 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 KRT82Q9NSB4 513 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CPSF3Q9UKF6 684 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 USH1CQ9Y6N9 552 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 EVPLQ92817 2033 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CACNA1GO43497 2377 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 C2CD4DB7Z1M9 353 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 STBD1O95210 358 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ADH1CP00326 375 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 APOEP02649 317 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 BRAFP15056 766 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 POU3F3P20264 500 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SLC29A2Q14542 456 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ARSHQ5FYA8 562 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 IRF2BP1Q8IU81 584 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ARID3BQ8IVW6 561 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 CNPY4Q8N129 248 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 LINC01465Q8N7H1 131 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SMARCD1Q96GM5 515 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ACBD6Q9BR61 282 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 HEMGNQ9BXL5 484 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 ISCUQ9H1K1 167 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 TMBIM4Q9HC24 238 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 GKN1Q9NS71 199 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 DUS2Q9NX74 493 aaKnown RBP6.23□□□□□ -1.41
SHQ1-205ENST00000468371 DONSONQ9NYP3 566 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 DNAJC12Q9UKB3 198 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 MAFFQ9ULX9 164 aa6.23□□□□□ -1.41
SHQ1-205ENST00000468371 SSU72P8A0A1W2PR75 194 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 SLC38A8A6NNN8 435 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 F8VP50 259 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PTGESO14684 152 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ANP32DO95626 131 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ECEL1O95672 775 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms