RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CHADO15335 359 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 RIPK2O43353 540 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 BEST1O76090 585 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 AGTP01019 485 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 IFNB1P01574 187 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CD48P09326 243 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 NCAM1P13591 858 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 GRIK1P39086 918 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 MAGEA6P43360 314 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CXCR3P49682 368 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 RPL10AP62906 217 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 DYNLT1P63172 113 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 SKOR1P84550 965 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 ZNF844Q08AG5 666 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 NR1H3Q13133 447 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 GPNMBQ14956 572 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 RASA2Q15283 850 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 LLGL1Q15334 1064 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 SLC45A4Q5BKX6 768 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 VARS2Q5ST30 1063 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 SH3PXD2AQ5TCZ1 1133 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 BSPRYQ5W0U4 402 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CTU1Q7Z7A3 348 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 NUP93Q8N1F7 819 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 PQLC3Q8N755 202 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 SLC7A14Q8TBB6 771 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CLEC4CQ8WTT0 213 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 SPATA17Q96L03 361 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 SERPINB12Q96P63 405 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 HAPLN3Q96S86 360 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CDK5RAP1Q96SZ6 601 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 LPIN3Q9BQK8 851 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 TMEM121Q9BTD3 319 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 WDCPQ9H6R7 721 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 FAM204AQ9H8W3 233 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 OLA1Q9NTK5 396 aaKnown RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 MAFFQ9ULX9 164 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
MSH5-213ENST00000468136 BACE2Q9Y5Z0 518 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 TTC3P53804 2025 aa10.57□□□□□ -0.72
MSH5-213ENST00000468136 FAM92AA1XBS5 289 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 C5orf60A6NFR6 353 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 YJEFN3A6XGL0 299 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 E7ENQ6 273 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 TNFRSF10BO14763 440 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ALOX15BO15296 676 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 GCATO75600 419 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 GALTP07902 379 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 GSTA2P09210 222 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 USP17L7P0C7H9 530 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PHBP35232 272 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 FDFT1P37268 417 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 COG7P83436 770 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 NRG1Q02297 640 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 TLE2Q04725 743 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 FAAP100Q0VG06 881 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 GPR17Q13304 367 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PAFAH1B3Q15102 231 aaKnown RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 MTFR1Q15390 333 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ZC3H12AQ5D1E8 599 aaKnown RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 BTBD8Q5XKL5 378 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 MSANTD2Q6P1R3 559 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 KDM7AQ6ZMT4 941 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 TAOK1Q7L7X3 1001 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 LRRC49Q8IUZ0 686 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PDIK1LQ8N165 341 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ZNF276Q8N554 614 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 LZTR1Q8N653 840 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 MCUQ8NE86 351 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ACSF2Q96CM8 615 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 LRRC39Q96DD0 335 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ZNF333Q96JL9 665 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PPP1R2P1Q96PQ5 205 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 QKIQ96PU8 341 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSH5-213ENST00000468136 KCTD15Q96SI1 283 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 RBM15Q96T37 977 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSH5-213ENST00000468136 KCNK16Q96T55 309 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 TTPALQ9BTX7 342 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 RETREG1Q9H6L5 497 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms