RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 USP33Q8TEY7 942 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 FUCA2Q9BTY2 467 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 DCLK3Q9C098 648 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 GANQ9H2C0 597 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 LHX5Q9H2C1 402 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 LIMA1Q9UHB6 759 aaKnown RBP15.86■□□□□ 0.13
ATG4B-215ENST00000468018 STOML2Q9UJZ1 356 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 FBXO10Q9UK96 956 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 STRIP2Q9ULQ0 834 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 EP300Q09472 2414 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-215ENST00000468018 GVINP1Q7Z2Y8 2422 aa15.86■□□□□ 0.13
ATG4B-215ENST00000468018 RALGAPA1Q6GYQ0 2036 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 CCDC163A0A0D9SF12 145 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 SLC12A8A0AV02 714 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PIK3R2O00459 728 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PAPSS1O43252 624 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PENKP01210 267 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 LMNAP02545 664 aaKnown RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 LTFP02788 710 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PNMA6AP0CW24 399 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 GRIA2P42262 883 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 KIR2DL1P43626 348 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PTK2Q05397 1052 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 DMWDQ09019 674 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 PDCLQ13371 301 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 DRAP1Q14919 205 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 RSRC2Q7L4I2 434 aaKnown RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 SLC47A2Q86VL8 602 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 EDEM1Q92611 657 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 BPIFA3Q9BQP9 254 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 SFMBT1Q9UHJ3 866 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 AGO1Q9UL18 857 aaKnown RBP15.85■□□□□ 0.13
ATG4B-215ENST00000468018 HCN2Q9UL51 889 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 SIK3Q9Y2K2 1263 aa15.85■□□□□ 0.13
ATG4B-215ENST00000468018 CKAP5Q14008 2032 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 E5RJQ4 531 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 SART1O43290 800 aaKnown RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 LATS1O95835 1130 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 APODP05090 189 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 TYRP14679 529 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 CDH5P33151 784 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 CHKAP35790 457 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 USP8P40818 1118 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 TNFRSF4P43489 277 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 COPB1P53618 953 aaKnown RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 MRPS21P82921 87 aaKnown RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 EIF4EBP2Q13542 120 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 ANO4Q32M45 955 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 FYB2Q5VWT5 728 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 LONP2Q86WA8 852 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 SCUBE3Q8IX30 993 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 CAMKK1Q8N5S9 505 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 TERB1Q8NA31 727 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 ATRIPQ8WXE1 791 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 DDX1Q92499 740 aaKnown RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 ACDQ96AP0 544 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 CPXM1Q96SM3 734 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 LSM14BQ9BX40 385 aaKnown RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 VPS16Q9H269 839 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 ARHGEF4Q9NR80 690 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 POLR3BQ9NW08 1133 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-215ENST00000468018 WDR35Q9P2L0 1181 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 TJP2Q9UDY2 1190 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 STARD13Q9Y3M8 1113 aa15.84■□□□□ 0.13
ATG4B-215ENST00000468018 NEDD8-MDP1E9PL57 170 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 F8VZ95 297 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 TRIM24O15164 1050 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 IGLV3-25P01717 112 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 HMBSP08397 361 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 CISD3P0C7P0 127 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 JAM2P57087 298 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 RING1Q06587 406 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 NNTQ13423 1086 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 KLHL40Q2TBA0 621 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 HSF5Q4G112 596 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-215ENST00000468018 TPGS1Q6ZTW0 290 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 WDR5BQ86VZ2 330 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 DENND1CQ8IV53 801 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 NAT16Q8N8M0 369 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 KCNV2Q8TDN2 545 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 RNF139Q8WU17 664 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 PIWIL1Q96J94 861 aaKnown RBP15.83■□□□□ 0.12
ATG4B-215ENST00000468018 BBS2Q9BXC9 721 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 STK33Q9BYT3 514 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 MIS12Q9H081 205 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 ST7Q9NRC1 585 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 DEC1Q9P2X7 70 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 MMP17Q9ULZ9 603 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 DAAM1Q9Y4D1 1078 aa15.83■□□□□ 0.12
ATG4B-215ENST00000468018 MUC22E2RYF6 1773 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 LGALS16A8MUM7 142 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 EPHB6O15197 1021 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 MSI1O43347 362 aaKnown RBP15.82■□□□□ 0.12
ATG4B-215ENST00000468018 CYP11B1P15538 503 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 CNR2P34972 360 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 FNTBP49356 437 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 KLK7P49862 253 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 BPIFB4P59827 614 aa15.82■□□□□ 0.12
ATG4B-215ENST00000468018 KDSRQ06136 332 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms