RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 KCNG4Q8TDN1 519 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 CLEC4CQ8WTT0 213 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ASB10Q8WXI3 467 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 PRR25Q96S07 402 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 TTPALQ9BTX7 342 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 TWSG1Q9GZX9 223 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ABHD16BQ9H3Z7 469 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 SAP30LQ9HAJ7 183 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ALG13Q9NP73 1137 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 TLR8Q9NR97 1041 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 CEP72Q9P209 647 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 AASSQ9UDR5 926 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 HSF4Q9ULV5 492 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 PSMD9O00233 223 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CES2O00748 559 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 PLSCR1O15162 318 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 SLC16A3O15427 465 aaKnown RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 SPRY2O43597 315 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 IL6RP08887 468 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CSF1P09603 554 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 NR2F6P10588 404 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 LYL1P12980 280 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CREB1P16220 341 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 PTGS2P35354 604 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 GGT5P36269 586 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CTSWP56202 376 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 TLE2Q04725 743 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 GALNT2Q10471 571 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 EFEMP1Q12805 493 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 TOMM20Q15388 145 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CYP1B1Q16678 543 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 PCGF5Q86SE9 256 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 NME8Q8N427 588 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 LRRC71Q8N4P6 559 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 FAM71DQ8N9W8 422 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 SLC25A43Q8WUT9 341 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 ST8SIA4Q92187 359 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 TFAP2BQ92481 460 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 HDAC2Q92769 488 aaKnown RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 LENG9Q96B70 501 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 FBXL20Q96IG2 436 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 C8orf49Q96NF6 230 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 REEP2Q9BRK0 252 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 NUDT22Q9BRQ3 303 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 PAIP1Q9H074 479 aaKnown RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 BLOC1S4Q9NUP1 217 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 LIN7CQ9NUP9 197 aaKnown RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 FBXO28Q9NVF7 368 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 NKX1-2Q9UD57 310 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-209ENST00000467124 SLC12A4Q9UP95 1085 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 ADGRA2Q96PE1 1338 aa4.63□□□□□ -1.67
VPS13A-209ENST00000467124 CCDC187A0A096LP49 1063 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 LOC105369274A0A096LPK9 316 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 LOC102723532A0A0G2JNH3 316 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 CENPVL1A0A0U1RR11 272 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 VWA3AA6NCI4 1184 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 TMEM200CA6NKL6 621 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 B4E171 279 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 PEX12O00623 359 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 PDE8BO95263 885 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 CAPN3P20807 821 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 ZEB1P37275 1124 aaPredicted RBP4.62□□□□□ -1.67
VPS13A-209ENST00000467124 TSPAN7P41732 249 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 DGCR2P98153 550 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 ITIH3Q06033 890 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 FZD5Q13467 585 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 KRT32Q14532 448 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 AAK1Q2M2I8 961 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 NRN1LQ496H8 165 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 USP39Q53GS9 565 aaKnown RBP4.62□□□□□ -1.67
VPS13A-209ENST00000467124 HYIQ5T013 277 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 MAP3K21Q5TCX8 1036 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 FAM90A2PQ658T7 463 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 DGAT2L7PQ6IED9 249 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 RNF207Q6ZRF8 634 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 ANKS1BQ7Z6G8 1248 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 DTX2Q86UW9 622 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 CHD1LQ86WJ1 897 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 C1orf210Q8IVY1 113 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 OR4N4Q8N0Y3 316 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 SOCS4Q8WXH5 440 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 NPIPB3Q92617 1050 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 RSC1A1Q92681 617 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 C20orf173Q96LM9 149 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 NEUROD6Q96NK8 337 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 AGXT2Q9BYV1 514 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 CLPBQ9H078 707 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 ACAD9Q9H845 621 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 IL21RQ9HBE5 538 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 NOD2Q9HC29 1040 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 TRIM36Q9NQ86 728 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 SWAP70Q9UH65 585 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 SLC13A4Q9UKG4 626 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 FZD1Q9UP38 647 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 ZBTB1Q9Y2K1 713 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 LMTK3Q96Q04 1460 aa4.62□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3DA0A087WVF3 549 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms