RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CCDC33Q8N5R6 958 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 CUL5Q93034 780 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 WDYHV1Q96HA8 205 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 WDR24Q96S15 920 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 VN1R3Q9BXE9 311 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 STK33Q9BYT3 514 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 TRIM36Q9NQ86 728 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 TBC1D23Q9NUY8 699 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 MTMR4Q9NYA4 1195 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 TAGLN3Q9UI15 199 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 RIMKLBQ9ULI2 386 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 H3BNC9 293 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 M0R3H8 397 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 PSMD9O00233 223 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 NDST3O95803 873 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 IFIT2P09913 472 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 EGR1P18146 543 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 ABCB4P21439 1286 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 MST1P26927 711 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 HOXD9P28356 352 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 SLC5A2P31639 672 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 CCKARP32238 428 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 SRSF1Q07955 248 aaKnown RBP eCLIP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 CACHD1Q5VU97 1274 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 RAP1GAP2Q684P5 730 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 RAB11FIP4Q86YS3 637 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 SPARTQ8N0X7 666 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 METTL25Q8N6Q8 603 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 LINC01465Q8N7H1 131 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 NSMCE1Q8WV22 266 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 C18orf8Q96DM3 657 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 ZNF668Q96K58 619 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 ZBTB45Q96K62 511 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 TTLL2Q9BWV7 592 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 EIF2AQ9BY44 585 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 WDR12Q9GZL7 423 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 CERS4Q9HA82 394 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 HEYLQ9NQ87 328 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 RGL1Q9NZL6 768 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 HPSEQ9Y251 543 aa5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-205ENST00000467114 FAM234BA2RU67 622 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 CES2O00748 559 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 ADAM10O14672 748 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 SPRY2O43597 315 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 RASAL1O95294 804 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 EPHA3P29320 983 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 ATICP31939 592 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 PPM1AP35813 382 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 ITGA8P53708 1063 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 BTKQ06187 659 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 LMAN2Q12907 356 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 MTAPQ13126 283 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 SLC5A9Q2M3M2 681 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 TRIM71Q2Q1W2 868 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 TMEM63BQ5T3F8 832 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 CRTC1Q6UUV9 634 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 DEF8Q6ZN54 512 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 PTCHD4Q6ZW05 846 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 PIP4P1Q86T03 277 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 OSR1Q8TAX0 266 aaPredicted RBP5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 SIGLEC11Q96RL6 698 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 ZBTB26Q9HCK0 441 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 NECTIN3Q9NQS3 549 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 GAR1Q9NY12 217 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 DNAJB11Q9UBS4 358 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 PCDHGB2Q9Y5G2 931 aa5.24□□□□□ -1.57
PRPF40A-205ENST00000467114 FAM90A10PA6NDY2 464 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 SETSIPP0DME0 302 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 APEHP13798 732 aaKnown RBP5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 THBS4P35443 961 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 GATMP50440 423 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 PGDP52209 483 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 CLCA4Q14CN2 919 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 KRT72Q14CN4 511 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 GPR162Q16538 588 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 ABLIM2Q6H8Q1 611 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 MZT2AQ6P582 158 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 SKAP1Q86WV1 359 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 CCDC28AQ8IWP9 274 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 MBD3L2Q8NHZ7 208 aaPredicted RBP5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 SUN3Q8TAQ9 357 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 PMM1Q92871 262 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 MAP4K1Q92918 833 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 LRRC46Q96FV0 321 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 TMEM41AQ96HV5 264 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 SNX27Q96L92 541 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 MAGEB5Q9BZ81 275 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 TM7SF3Q9NS93 570 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 PI4KBQ9UBF8 816 aa5.23□□□□□ -1.57
PRPF40A-205ENST00000467114 ZMYM2Q9UBW7 1377 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 NTSR1P30989 418 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 MCM5P33992 734 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 LARS2Q15031 903 aaKnown RBP5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 ACOX1Q15067 660 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 MAPKAPK3Q16644 382 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 KAZALD1Q96I82 304 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 RPS6KC1Q96S38 1066 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms