RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 IGLV3-27P01718 113 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 KCNA5P22460 613 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 FSHRP23945 695 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 PSMA2P25787 234 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 WEE1P30291 646 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 SULT1E1P49888 294 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 HDAC4P56524 1084 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 SLC7A9P82251 487 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ZXDBP98169 803 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 EFEMP1Q12805 493 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 NNTQ13423 1086 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 ACAP1Q15027 740 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 CLUL1Q15846 466 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ATAT1Q5SQI0 421 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 C10orf120Q5SQS8 335 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 GPR158Q5T848 1215 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 DAB2IPQ5VWQ8 1189 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 CES5AQ6NT32 575 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 EP400NLQ6ZTU2 488 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 CYP4V2Q6ZWL3 525 aaPredicted RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 RSRC2Q7L4I2 434 aaKnown RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 SLFN11Q7Z7L1 901 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 TADA2BQ86TJ2 420 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 MAB21L3Q8N8X9 362 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ADAMTS19Q8TE59 1207 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 RNF139Q8WU17 664 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ING5Q8WYH8 240 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 SLC39A13Q96H72 371 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 RIPOR3Q96MK2 946 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 KLF16Q9BXK1 252 aaPredicted RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 POMKQ9H5K3 350 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 PIGVQ9NUD9 493 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 MARCH2Q9P0N8 246 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 SFMBT1Q9UHJ3 866 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 ZMYM5Q9UJ78 669 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 DNMT3LQ9UJW3 386 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 STAP1Q9ULZ2 295 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 GUCA1BQ9UMX6 200 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 USP15Q9Y4E8 981 aaPredicted RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 TRAV19A0A0A6YYK7 116 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 GOLGA6L9A6NEM1 432 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 I6L893 689 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 M0QYT0 321 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 MBTPS2O43462 519 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 LRCH4O75427 683 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 PRAMEF12O95522 483 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 TCF4P15884 667 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 ATP5C1P36542 298 aaKnown RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 NOP2P46087 812 aaKnown RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 CXCR3P49682 368 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 ATXN1P54253 815 aaKnown RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 ATP11AP98196 1134 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 SLC25A11Q02978 314 aaKnown RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 PIGHQ14442 188 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 MESDQ14696 234 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 CBX2Q14781 532 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 TRIP4Q15650 581 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 ARHGAP15Q53QZ3 475 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 CMTM8Q8IZV2 173 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 FGF13Q92913 245 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 FCRL2Q96LA5 508 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 NECTIN4Q96NY8 510 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 SERPINB11Q96P15 392 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 MYADMQ96S97 322 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 IRX2Q9BZI1 471 aaPredicted RBP11.61□□□□□ -0.55
VCP-204ENST00000466100 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 ANLNQ9NQW6 1124 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 DDIT4Q9NX09 232 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 RASAL2Q9UJF2 1139 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 TLR6Q9Y2C9 796 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 COL4A3Q01955 1670 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 MYOFQ9NZM1 2061 aa11.61□□□□□ -0.55
VCP-204ENST00000466100 GREM1O60565 184 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 PALMO75781 387 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 TCF3P15923 654 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 HDCP19113 662 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 FCARP24071 287 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 MIPP30301 263 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
VCP-204ENST00000466100 PCK1P35558 622 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 TAS2R40P59535 323 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 RING1Q06587 406 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 USP4Q13107 963 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 IFI16Q16666 785 aaKnown RBP11.6□□□□□ -0.55
VCP-204ENST00000466100 CDO1Q16878 200 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms