RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 AARS2Q5JTZ9 985 aaKnown RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 PXDC1Q5TGL8 231 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 DENND2CQ68D51 928 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 Q6ZWC4 215 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 ZNF804AQ7Z570 1209 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 SIRT6Q8N6T7 355 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 SUN3Q8TAQ9 357 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 MORC4Q8TE76 937 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 WDR24Q96S15 920 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 NUDT22Q9BRQ3 303 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 FSD1LQ9BXM9 530 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 DUSP22Q9NRW4 184 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 HELLSQ9NRZ9 838 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 DLL3Q9NYJ7 618 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 CCNL1Q9UK58 526 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 SLC27A6Q9Y2P4 619 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 QSOX1O00391 747 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 PPP6CO00743 305 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 VNN1O95497 513 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 NPSP0C0P6 89 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 FAM163BP0C2L3 166 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 EBLN1P0CF75 366 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 PECAM1P16284 738 aaPredicted RBP5□□□□□ -1.61
LRCH3-211ENST00000466054 NTSR1P30989 418 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 CYP2C18P33260 490 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 HTR7P34969 479 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 CCT8P50990 548 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 EEFSECP57772 596 aaKnown RBP5□□□□□ -1.61
LRCH3-211ENST00000466054 BLMHQ13867 455 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 PTK2BQ14289 1009 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 PDCD2Q16342 344 aaPredicted RBP5□□□□□ -1.61
LRCH3-211ENST00000466054 CYP1B1Q16678 543 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 TRIM71Q2Q1W2 868 aaKnown RBP5□□□□□ -1.61
LRCH3-211ENST00000466054 GRAMD1BQ3KR37 738 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 KRTAP27-1Q3LI81 207 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 ZACNQ401N2 412 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 TLDC1Q6P9B6 456 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 SLC2A7Q6PXP3 512 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 CLEC9AQ6UXN8 241 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 NGDNQ8NEJ9 315 aaKnown RBP5□□□□□ -1.61
LRCH3-211ENST00000466054 ABHD11Q8NFV4 315 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 FAM71BQ8TC56 605 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 TBC1D5Q92609 795 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 GRAMD1AQ96CP6 724 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 C18orf8Q96DM3 657 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 PRR25Q96S07 402 aa5□□□□□ -1.61
LRCH3-211ENST00000466054 H0YIZ8 118 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 SYT5O00445 386 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 NPC1O15118 1278 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 TMPRSS11DO60235 418 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 TCEA3O75764 348 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 WDR47O94967 919 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 NTSR2O95665 410 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 HNRNPCP07910 306 aaKnown RBP eCLIP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 ITGA5P08648 1049 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 MYCLP12524 364 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 NPPBP16860 134 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 EIF4A1P60842 406 aaKnown RBP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 FHL3Q13643 280 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 SPARCL1Q14515 664 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 ACOX1Q15067 660 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 PFKFB4Q16877 469 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 SUPT20HL1Q3ZLR7 823 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 TMEM63BQ5T3F8 832 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 PTCHD4Q6ZW05 846 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 GATAD2AQ86YP4 633 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 RASGRP3Q8IV61 690 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 SFTPA1Q8IWL2 248 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 FSTL5Q8N475 847 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 IPO4Q8TEX9 1081 aaKnown RBP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 CTHRC1Q96CG8 243 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 EID2BQ96D98 161 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 VPS50Q96JG6 964 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 SH2D3AQ9BRG2 576 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 OBP2BQ9NPH6 170 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 RXFP3Q9NSD7 469 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 TUBA8Q9NY65 449 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-211ENST00000466054 MTMR4Q9NYA4 1195 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 IGSF9Q9P2J2 1179 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 AMFRQ9UKV5 643 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 ADAMTS5Q9UNA0 930 aa4.99□□□□□ -1.61
LRCH3-211ENST00000466054 TARM1B6A8C7 271 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 PIP5K1BO14986 540 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 ZSCAN9O15535 394 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 CBFA2T3O75081 653 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 CSTBP04080 98 aaKnown RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 TMEM225BP0DP42 221 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 CREB1P16220 341 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 ENGP17813 658 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 DRD4P21917 467 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 PDIA3P30101 505 aaKnown RBP4.98□□□□□ -1.61
LRCH3-211ENST00000466054 NR4A2P43354 598 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 DGKQP52824 942 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 POLE2P56282 527 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 E2F1Q01094 437 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 ARHGAP15Q53QZ3 475 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 TTC30AQ86WT1 665 aa4.98□□□□□ -1.61
LRCH3-211ENST00000466054 METTL25Q8N6Q8 603 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms