RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 FAM109AQ8N4B1 249 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 DTX3Q8N9I9 347 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 FBXL8Q96CD0 374 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TOE1Q96GM8 510 aaKnown RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ZNF347Q96SE7 839 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 C1orf50Q9BV19 199 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 NPHS2Q9NP85 383 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SENP1Q9P0U3 644 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 POLIQ9UNA4 740 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TRAF6Q9Y4K3 522 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 MAU2Q9Y6X3 613 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SMCO2A6NFE2 343 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 H0YJX3 145 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 H3BNH8 94 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SNPHO15079 494 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 MTSS1O43312 755 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ITGB3P05106 788 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SNRPAP09012 282 aaKnown RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 KRT3P12035 628 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 HSPA6P17066 643 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ITGAXP20702 1163 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 GSTM2P28161 218 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ESRRGP62508 458 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TMPRSS15P98073 1019 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 CDC20Q12834 499 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 CCNIQ14094 377 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TBCCQ15814 346 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 LINC00299Q6ZSB3 139 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 LYSMD3Q7Z3D4 306 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 SRRM1Q8IYB3 904 aaKnown RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 ADGRG5Q8IZF4 528 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TPCN2Q8NHX9 752 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 PYDC1Q8WXC3 89 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 RPRD1AQ96P16 312 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 RMDN3Q96TC7 470 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 RNF26Q9BY78 433 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-203ENST00000466045 TRIM15Q9C019 465 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 BCAP29Q9UHQ4 241 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 AP4S1Q9Y587 144 aa9.78□□□□□ -0.84
CDHR3-203ENST00000466045 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
CDHR3-203ENST00000466045 QSER1Q2KHR3 1735 aa9.77□□□□□ -0.84
CDHR3-203ENST00000466045 ESYT2A0FGR8 921 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TTC4O95801 387 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 ATP5BP06576 529 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NCAM1P13591 858 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CCNE1P24864 410 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TM4SF1P30408 202 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NMT1P30419 496 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CHRNA3P32297 505 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 RPL9P32969 192 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 GRIK1P39086 918 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NR2C2P49116 596 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 ZNF200P98182 395 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 RUNX1T1Q06455 604 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 KLHL30Q0D2K2 578 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NFIXQ14938 502 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 IQSEC1Q6DN90 963 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TTC27Q6P3X3 843 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CENPUQ71F23 418 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CHERPQ8IWX8 916 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 DIS3L2Q8IYB7 885 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CLYBLQ8N0X4 340 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CLIP4Q8N3C7 705 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 GIMAP8Q8ND71 665 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 ADCY4Q8NFM4 1077 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 RFWD2Q8NHY2 731 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 PHKBQ93100 1093 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CNBD2Q96M20 576 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 DCUN1D5Q9BTE7 237 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 THTPAQ9BU02 230 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 C1QTNF7Q9BXJ2 289 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 WNT8AQ9H1J5 351 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 BLZF1Q9H2G9 400 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 ARMT1Q9H993 441 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CNOT11Q9UKZ1 510 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 SLC8A2Q9UPR5 921 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NAALADL1Q9UQQ1 740 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 EIF3LQ9Y262 564 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 ZHX2Q9Y6X8 837 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TRIM64A6NGJ6 449 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 H3BMQ9 156 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 HDAC3O15379 428 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 DYRK3O43781 588 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NTSR2O95665 410 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 FGGP02679 453 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 NR4A2P43354 598 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 UBXN2AP68543 259 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 CALCOCO2Q13137 446 aa9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TARDBPQ13148 414 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
CDHR3-203ENST00000466045 SLC10A5Q5PT55 438 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms