RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CCDC124Q96CT7 223 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 ZNF778Q96MU6 729 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 TAAR1Q96RJ0 339 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 HAPLN2Q9GZV7 340 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 RBM38Q9H0Z9 239 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 ZNF696Q9H7X3 374 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 PLAC1Q9HBJ0 212 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 THEGQ9P2T0 379 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 INPP5FQ9Y2H2 1132 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 SLC15A5A6NIM6 579 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 PFDN1O60925 122 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 ENDOD1O94919 500 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 MYCLP12524 364 aaPredicted RBP20.4■□□□□ 0.86
SDF4-205ENST00000465727 ITGAXP20702 1163 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 HIRAP54198 1017 aaPredicted RBP20.4■□□□□ 0.86
SDF4-205ENST00000465727 DEUP1Q05D60 604 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 CYLC2Q14093 348 aaPredicted RBP20.4■□□□□ 0.86
SDF4-205ENST00000465727 XRRA1Q6P2D8 792 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 KLHDC10Q6PID8 442 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 C4orf22Q6V702 233 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 CAND1Q86VP6 1230 aaKnown RBP20.4■□□□□ 0.86
SDF4-205ENST00000465727 ADGRF2Q8IZF7 708 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 DEFB107AQ8IZN7 70 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 PQLC1Q8N2U9 271 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 DDI1Q8WTU0 396 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 DCUN1D1Q96GG9 259 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 PDCD2LQ9BRP1 358 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 SDCBP2Q9H190 292 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 ARHGAP26Q9UNA1 814 aa20.4■□□□□ 0.86
SDF4-205ENST00000465727 H7C0C1 242 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 GLRA3O75311 464 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 TRUB2O95900 331 aaKnown RBP20.39■□□□□ 0.86
SDF4-205ENST00000465727 MIPP30301 263 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 ATP5OP48047 213 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 NRLP54845 237 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 USP4Q13107 963 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 RARS2Q5T160 578 aaKnown RBP20.39■□□□□ 0.86
SDF4-205ENST00000465727 MROH9Q5TGP6 573 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 PDPK2PQ6A1A2 396 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 UNC5AQ6ZN44 842 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 CYS1Q717R9 158 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 WDR49Q8IV35 697 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 SLC4A11Q8NBS3 891 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 GCNAQ96QF7 691 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 TMOD2Q9NZR1 351 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 SEPT9Q9UHD8 586 aaPredicted RBP20.39■□□□□ 0.86
SDF4-205ENST00000465727 LZTS1Q9Y250 596 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 ADGRA2Q96PE1 1338 aa20.39■□□□□ 0.86
SDF4-205ENST00000465727 TESPA1A2RU30 521 aaPredicted RBP20.39■□□□□ 0.85
SDF4-205ENST00000465727 HMX2A2RU54 273 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 MAFGO15525 162 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 MED7O43513 233 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 ATG7O95352 703 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 GSRP00390 522 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 SERPINE1P05121 402 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 PSAPP07602 524 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 FGF3P11487 239 aaPredicted RBP20.39■□□□□ 0.85
SDF4-205ENST00000465727 PMLP29590 882 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 IDH3AP50213 366 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 PSMC1P62191 440 aaKnown RBP20.39■□□□□ 0.85
SDF4-205ENST00000465727 ADRM1Q16186 407 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 USP41Q3LFD5 358 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 FSCBQ5H9T9 825 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 HPS6Q86YV9 775 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 TFAP2BQ92481 460 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 HSPH1Q92598 858 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 ATP2A3Q93084 1043 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 USP18Q9UMW8 372 aa20.39■□□□□ 0.85
SDF4-205ENST00000465727 CAPN8A6NHC0 703 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 MAGEA3P43357 314 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 MAGEA8P43361 318 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 HSPA13P48723 471 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 RPS6P62753 249 aaKnown RBP20.38■□□□□ 0.85
SDF4-205ENST00000465727 CREB5Q02930 508 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 CNGA3Q16281 694 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 GPRASP2Q96D09 838 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 RMDN3Q96TC7 470 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 CYP4F11Q9HBI6 524 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 PXMP2Q9NR77 195 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 PCSK1NQ9UHG2 260 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 K7ERI5 159 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 ITM2AO43736 263 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 UGT1A9O60656 530 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 DNAJA2O60884 412 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 NAMPTP43490 491 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 TGFB2P61812 414 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 SULT2A1Q06520 285 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 NADK2Q4G0N4 442 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 ZNF394Q53GI3 561 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 ZBTB41Q5SVQ8 909 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 PLEKHG4BQ96PX9 1271 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 RTKNQ9BST9 563 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 UGT1A7Q9HAW7 530 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 UGT1A10Q9HAW8 530 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 UGT1A8Q9HAW9 530 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 ASNSD1Q9NWL6 643 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 PADI4Q9UM07 663 aa20.38■□□□□ 0.85
SDF4-205ENST00000465727 APBA3O96018 575 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 CST3P01034 146 aaPredicted RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 SCN4AP35499 1836 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms