RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CTTNBP2NLQ9P2B4 639 aa14.55□□□□□ -0.08
HDAC6-215ENST00000465457 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
HDAC6-215ENST00000465457 FLNBO75369 2602 aaKnown RBP14.55□□□□□ -0.08
HDAC6-215ENST00000465457 MYBPHLA2RUH7 354 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 MED7O43513 233 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 XPOTO43592 962 aaKnown RBP14.54□□□□□ -0.08
HDAC6-215ENST00000465457 MICAL2O94851 1124 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 FTCDO95954 541 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 CYP1A1P04798 512 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-215ENST00000465457 NFICP08651 508 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 PAEPP09466 180 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 HOXA6P31267 233 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 ELF1P32519 619 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 FCHO2Q0JRZ9 810 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 JADE1Q6IE81 842 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 SPOPLQ6IQ16 392 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 CREG2Q8IUH2 290 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 MSANTD4Q8NCY6 345 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 LRRN4CLQ8ND94 238 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 LOXL4Q96JB6 756 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 ZNF518BQ9C0D4 1074 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 DNAI2Q9GZS0 605 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 SLITRK6Q9H5Y7 841 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC6-215ENST00000465457 CISHQ9NSE2 258 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC6-215ENST00000465457 CEP83Q9Y592 693 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 V9GYY5 206 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-215ENST00000465457 OBSL1O75147 1896 aa14.54□□□□□ -0.08
HDAC6-215ENST00000465457 PCNX2A6NKB5 2137 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
HDAC6-215ENST00000465457 PTPRDP23468 1912 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 DENND4CQ5VZ89 1909 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 A0A1W2PRU2 124 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 LNP1A1A4G5 178 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 TARSL2A2RTX5 802 aaKnown RBP14.53□□□□□ -0.08
HDAC6-215ENST00000465457 ZNF197O14709 1029 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 DCLK1O15075 740 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 VNN2O95498 520 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 CST3P01034 146 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-215ENST00000465457 UNGP13051 313 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-215ENST00000465457 H2AFXP16104 143 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-215ENST00000465457 ASPAP45381 313 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 EPHA5P54756 1037 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 MYO1EQ12965 1108 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 BRD3Q15059 726 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 DGKKQ5KSL6 1271 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 CYP4A22Q5TCH4 519 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 C1orf127Q8N9H9 656 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 BEST2Q8NFU1 509 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 TSC1Q92574 1164 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 ZNF653Q96CK0 615 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 CHFRQ96EP1 664 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 MMS19Q96T76 1030 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 ABCB6Q9NP58 842 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 TAS2R14Q9NYV8 317 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 SCINQ9Y6U3 715 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 BPTFQ12830 3046 aa14.53□□□□□ -0.08
HDAC6-215ENST00000465457 TNRC6BQ9UPQ9 1833 aaKnown RBP14.52□□□□□ -0.08
HDAC6-215ENST00000465457 CHADO15335 359 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 THAP12O43422 761 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 BUB1BO60566 1050 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ERLIN1O75477 346 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 PRAMEF12O95522 483 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ITGB3P05106 788 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 KRT19P08727 400 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 MLLT6P55198 1093 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 PLK5Q496M5 336 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 GLE1Q53GS7 698 aaKnown RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 NT5DC3Q86UY8 548 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 PHF13Q86YI8 300 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 TMC8Q8IU68 726 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 YAF2Q8IY57 180 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 MMGT1Q8N4V1 131 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 LRRC52Q8N7C0 313 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 UBL4BQ8N7F7 174 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ACTRT1Q8TDG2 376 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ARHGEF26Q96DR7 871 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 KIF12Q96FN5 646 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 HES6Q96HZ4 224 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 CAPZA3Q96KX2 299 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 HHIPQ96QV1 700 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 NAP1L3Q99457 506 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 LRRC3Q9BY71 257 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 DUSP15Q9H1R2 295 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 CRISPLD1Q9H336 500 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 MRPL47Q9HD33 250 aaKnown RBP14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ASAH2Q9NR71 780 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 VPS45Q9NRW7 570 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 DPP3Q9NY33 737 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 CNTN3Q9P232 1028 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 SIX4Q9UIU6 781 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 ADAMTS9Q9P2N4 1935 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 TSC2P49815 1807 aa14.52□□□□□ -0.09
HDAC6-215ENST00000465457 CCDC151A5D8V7 595 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms