RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 FAM217AQ8IXS0 508 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 NOX5Q96PH1 765 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 NAT10Q9H0A0 1025 aaKnown RBP17.01■□□□□ 0.31
SSNA1-204ENST00000464553 AGO1Q9UL18 857 aaKnown RBP17.01■□□□□ 0.31
SSNA1-204ENST00000464553 RAB23Q9ULC3 237 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 MMP17Q9ULZ9 603 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 SLC27A6Q9Y2P4 619 aa17.01■□□□□ 0.31
SSNA1-204ENST00000464553 TBC1D3BA6NDS4 549 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 FOXN3O00409 490 aaPredicted RBP17■□□□□ 0.31
SSNA1-204ENST00000464553 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
SSNA1-204ENST00000464553 PENKP01210 267 aaPredicted RBP17■□□□□ 0.31
SSNA1-204ENST00000464553 GLI1P08151 1106 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 KRT9P35527 623 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 KIR2DL1P43626 348 aaPredicted RBP17■□□□□ 0.31
SSNA1-204ENST00000464553 FNTBP49356 437 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 DGKEP52429 567 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 MYL5Q02045 173 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 KCNMA1Q12791 1236 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 DMC1Q14565 340 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 EOGTQ5NDL2 527 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 GRAMD4Q6IC98 578 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 DENND1BQ6P3S1 775 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 PKN3Q6P5Z2 889 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 GJB7Q6PEY0 223 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 C12orf40Q86WS4 652 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 SCUBE3Q8IX30 993 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 FANCMQ8IYD8 2048 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
SSNA1-204ENST00000464553 ST7Q9NRC1 585 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 TMEM51Q9NW97 253 aa17■□□□□ 0.31
SSNA1-204ENST00000464553 NEDD8-MDP1E9PL57 170 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
SSNA1-204ENST00000464553 NPC1O15118 1278 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 APBB3O95704 486 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 UCHL3P15374 230 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 CLCN1P35523 988 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 C2orf27AQ580R0 203 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 FKBP15Q5T1M5 1219 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 ADGRF1Q5T601 910 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 NUGGCQ68CJ6 796 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 TPGS1Q6ZTW0 290 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 TERB1Q8NA31 727 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 EDEM1Q92611 657 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 NAA15Q9BXJ9 866 aaKnown RBP16.99■□□□□ 0.31
SSNA1-204ENST00000464553 STK33Q9BYT3 514 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 DNAJC17Q9NVM6 304 aaKnown RBP16.99■□□□□ 0.31
SSNA1-204ENST00000464553 FANCLQ9NW38 375 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 C2orf42Q9NWW7 574 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 CEP83Q9Y592 693 aa16.99■□□□□ 0.31
SSNA1-204ENST00000464553 HRO43593 1189 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 ALDH1A2O94788 518 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 IGLV3-27P01718 113 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 CISD3P0C7P0 127 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 DGKGP49619 791 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 KRT31Q15323 416 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 CRY1Q16526 586 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 MPPE1Q53F39 396 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 HSP90AA4PQ58FG1 418 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 EFHC1Q5JVL4 640 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 MPP7Q5T2T1 576 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 LAIR1Q6GTX8 287 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 C11orf74Q86VG3 221 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 ZDHHC17Q8IUH5 632 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 DENND1CQ8IV53 801 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 NAT16Q8N8M0 369 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 ZNF557Q8N988 423 aaPredicted RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 IL17RCQ8NAC3 791 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 GAB3Q8WWW8 586 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 LOXL4Q96JB6 756 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 SERPINB11Q96P15 392 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 DDX50Q9BQ39 737 aaKnown RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 LIMA1Q9UHB6 759 aaKnown RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
SSNA1-204ENST00000464553 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
SSNA1-204ENST00000464553 ZFHX2Q9C0A1 2572 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-204ENST00000464553 GFRA2O00451 464 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 AXIN1O15169 862 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 IRAK2O43187 625 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 TIMM44O43615 452 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 LRP3O75074 770 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 CALCAP01258 141 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 HMBSP08397 361 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-204ENST00000464553 NCAM1P13591 858 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 HNRNPLP14866 589 aaKnown RBP eCLIP16.97■□□□□ 0.31
SSNA1-204ENST00000464553 PTMSP20962 102 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 SLC11A2P49281 568 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 APBA1Q02410 837 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 MTA1Q13330 715 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 PDCLQ13371 301 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 SIM2Q14190 667 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-204ENST00000464553 FYB2Q5VWT5 728 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 SDE2Q6IQ49 451 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 WDTC1Q8N5D0 677 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 PPP1R13BQ96KQ4 1090 aa16.97■□□□□ 0.31
SSNA1-204ENST00000464553 BPIFA3Q9BQP9 254 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms