RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 ASTLQ6HA08 431 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 RHBDF2Q6PJF5 856 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SARM1Q6SZW1 724 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SLC26A9Q7LBE3 791 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 XYLT1Q86Y38 959 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SYN2Q92777 582 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 PLD4Q96BZ4 506 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 FOXQ1Q9C009 403 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 HAUS4Q9H6D7 363 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 SIT1Q9Y3P8 196 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 ZDBF2Q9HCK1 2354 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 COL4A3Q01955 1670 aa15.15■□□□□ 0.02
SQSTM1-205ENST00000464493 FAM170BA6NMN3 283 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 MSI1O43347 362 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 GRAP2O75791 330 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 KLKB1P03952 638 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 AOC1P19801 751 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 MMP8P22894 467 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 CORO1AP31146 461 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 CASP14P31944 242 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 GJA4P35212 333 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 PRKCIP41743 596 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 HARS2P49590 506 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 CENPCQ03188 943 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 KLHL30Q0D2K2 578 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 UBXN2BQ14CS0 331 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 DHCR24Q15392 516 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 DCAF6Q58WW2 860 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 E4F1Q66K89 784 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 Q6ZNB5 142 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 VSTM4Q8IW00 320 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 DEFB106AQ8N104 65 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 PJA1Q8NG27 643 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 DQX1Q8TE96 717 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 SERPINB11Q96P15 392 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 SLC2A13Q96QE2 648 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 SYT11Q9BT88 431 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 LTB4R2Q9NPC1 389 aa15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 MTF2Q9Y483 593 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-205ENST00000464493 MYOFQ9NZM1 2061 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 AP5Z1O43299 807 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 PI15O43692 258 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 ADH1CP00326 375 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 CYP17A1P05093 508 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 SKILP12757 684 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 AVPR2P30518 371 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 SCNN1AP37088 669 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 TBX4P57082 545 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 RNASE9P60153 205 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 CDK17Q00537 523 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 TRIM14Q14142 442 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 LY6G5CQ5SRR4 150 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 FAM102AQ5T9C2 384 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 TXNDC11Q6PKC3 985 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 MMS22LQ6ZRQ5 1243 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 ZNF571Q7Z3V5 609 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 PHF13Q86YI8 300 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 DENND1CQ8IV53 801 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 UNC45BQ8IWX7 931 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 ADAM32Q8TC27 787 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 CHFRQ96EP1 664 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 C11orf70Q9BRQ4 267 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 OSBPL6Q9BZF3 934 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 SPHK2Q9NRA0 654 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 ADAM22Q9P0K1 906 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 AGO1Q9UL18 857 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 NDRG2Q9UN36 371 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 TLR6Q9Y2C9 796 aa15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-205ENST00000464493 GOLGA8SH3BPF8 625 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 NCAM2O15394 837 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 DAB1O75553 588 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TARSP26639 723 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 NOS2P35228 1153 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 CHKAP35790 457 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 VCPP55072 806 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 RING1Q06587 406 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 NNTQ13423 1086 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 PON2Q15165 354 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 NUGGCQ68CJ6 796 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 ACAD10Q6JQN1 1059 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TAC4Q86UU9 113 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TMEM25Q86YD3 366 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 ZNF687Q8N1G0 1237 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TMEM105Q8N8V8 129 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.12■□□□□ 0.015e-15■■□□□ 14.4
SQSTM1-205ENST00000464493 WDR35Q9P2L0 1181 aa15.12■□□□□ 0.01
SQSTM1-205ENST00000464493 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 IGLV3-25P01717 112 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 IGLV3-27P01718 113 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 SERPING1P05155 500 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 CALB1P05937 261 aa15.11■□□□□ 0.01
SQSTM1-205ENST00000464493 DCNP07585 359 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms