RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 ZNF213O14771 459 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CA12O43570 354 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 EXOC3O60645 756 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 JTBO76095 146 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 NUDT3O95989 172 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 GPD1P21695 349 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 MMP8P22894 467 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 FPR3P25089 353 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CYP4F2P78329 520 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 TXNL4AP83876 142 aaKnown RBP4.91□□□□□ -1.62
USP9X-204ENST00000463829 HOXA4Q00056 320 aaPredicted RBP4.91□□□□□ -1.62
USP9X-204ENST00000463829 COL10A1Q03692 680 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 LMAN2Q12907 356 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 BFSP2Q13515 415 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 DNASE1L3Q13609 305 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 INO80DQ53TQ3 878 aaPredicted RBP4.91□□□□□ -1.62
USP9X-204ENST00000463829 FAM90A2PQ658T7 463 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CCDC144NLQ6NUI1 221 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 KLHL17Q6TDP4 642 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 KIRREL2Q6UWL6 708 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CCDC117Q8IWD4 279 aaPredicted RBP4.91□□□□□ -1.62
USP9X-204ENST00000463829 C12orf76Q8N812 135 aaPredicted RBP4.91□□□□□ -1.62
USP9X-204ENST00000463829 ANKRD42Q8N9B4 389 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 TERB1Q8NA31 727 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CIPCQ9C0C6 399 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 KLK15Q9H2R5 256 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 SEMA4GQ9NTN9 838 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 ASB6Q9NWX5 421 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 GRHPRQ9UBQ7 328 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 NFU1Q9UMS0 254 aa4.91□□□□□ -1.62
USP9X-204ENST00000463829 CTIFO43310 598 aaKnown RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 ACTL6BO94805 426 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 TMIGD3P0DMS9 266 aaPredicted RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 KLRK1P26718 216 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 AKT1P31749 480 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 COPB1P53618 953 aaKnown RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 CCDC15Q0P6D6 951 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 ZNF362Q5T0B9 420 aaPredicted RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 TANGO2Q6ICL3 276 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 MSANTD2Q6P1R3 559 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 PIK3AP1Q6ZUJ8 805 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 KRT27Q7Z3Y8 459 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 OTUD7AQ8TE49 926 aaPredicted RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 DAZAP1Q96EP5 407 aaKnown RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 SNX18Q96RF0 628 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 PAAF1Q9BRP4 392 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 RTKNQ9BST9 563 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 SORBS1Q9BX66 1292 aaKnown RBP4.9□□□□□ -1.63
USP9X-204ENST00000463829 TMEM120AQ9BXJ8 343 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 USP29Q9HBJ7 922 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 ZNHIT2Q9UHR6 403 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 WNT6Q9Y6F9 365 aa4.9□□□□□ -1.63
USP9X-204ENST00000463829 LOC102724159A0A0B4J2E5 919 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 TARM1B6A8C7 271 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 PIP5K1CO60331 668 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 CER1O95813 267 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 MT-CO3P00414 261 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 GYS1P13807 737 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 LMO1P25800 156 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 AP2B1P63010 937 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 GPC5P78333 572 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 CFHR3Q02985 330 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 PRKG1Q13976 671 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 PWP2Q15269 919 aaKnown RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 C4orf46Q504U0 113 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 STRIP1Q5VSL9 837 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 SULT6B1Q6IMI4 303 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 TRIM72Q6ZMU5 477 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 BCDIN3DQ7Z5W3 292 aaKnown RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 TRABD2AQ86V40 505 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 SLC44A2Q8IWA5 706 aaPredicted RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 GALNT15Q8N3T1 639 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 OR1N1Q8NGS0 311 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 STT3BQ8TCJ2 826 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 TRIM63Q969Q1 353 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 SARAFQ96BY9 339 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 EDC3Q96F86 508 aaKnown RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 MMS19Q96T76 1030 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 MACROD1Q9BQ69 325 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 PABPC3Q9H361 631 aaKnown RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 RIOX1Q9H6W3 641 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 SAP30LQ9HAJ7 183 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 VPS45Q9NRW7 570 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 FBXO28Q9NVF7 368 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 GAR1Q9NY12 217 aaKnown RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 ADAM21Q9UKJ8 722 aa4.89□□□□□ -1.63
USP9X-204ENST00000463829 COL11A2P13942 1736 aaPredicted RBP4.89□□□□□ -1.63
USP9X-204ENST00000463829 PCSK5Q92824 1860 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 EFCAB8A8MWE9 144 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 H7C1Q1 480 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 VEGFAP15692 232 aaPredicted RBP4.88□□□□□ -1.63
USP9X-204ENST00000463829 IGHMBP2P38935 993 aaKnown RBP4.88□□□□□ -1.63
USP9X-204ENST00000463829 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
USP9X-204ENST00000463829 ELLP55199 621 aaPredicted RBP4.88□□□□□ -1.63
USP9X-204ENST00000463829 TRIM60Q495X7 471 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 LIN54Q6MZP7 749 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 RAB11FIP2Q7L804 512 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 AMIGO2Q86SJ2 522 aa4.88□□□□□ -1.63
USP9X-204ENST00000463829 ARHGEF25Q86VW2 580 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms