RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CSNK1G1Q9HCP0 422 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 SCML2Q9UQR0 700 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF510Q9Y2H8 683 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CELSR3Q9NYQ7 3312 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 PLXNB3Q9ULL4 1909 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 FAM149AA5PLN7 773 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 E9PAM4 449 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 TGFB1I1O43294 461 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 IGLV3-19P01714 112 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 P4HA1P13674 534 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 CCDC130P13994 396 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 TRIM21P19474 475 aaKnown RBP15.24■□□□□ 0.03
SMC1A-204ENST00000463684 CHKAP35790 457 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 GRK6P43250 576 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 ABCG1P45844 678 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 ARID5AQ03989 594 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 ENPP2Q13822 863 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 C10orf120Q5SQS8 335 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 KLHDC10Q6PID8 442 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 SCARA5Q6ZMJ2 495 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 TADA2BQ86TJ2 420 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 FAM124AQ86V42 546 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 PDILTQ8N807 584 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 SLC2A14Q8TDB8 520 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 BTBD3Q9Y2F9 522 aa15.24■□□□□ 0.03
SMC1A-204ENST00000463684 A0A087X0B3 334 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 TK2O00142 265 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 EPHX1P07099 455 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 FAM200BP0CF97 657 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 RARGP13631 454 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 HLA-EP13747 358 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 AP3M2P53677 418 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 MFAP3P55082 362 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 AMPD3Q01432 767 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF234Q14588 700 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 SMAD1Q15797 465 aaKnown RBP15.23■□□□□ 0.03
SMC1A-204ENST00000463684 GEN1Q17RS7 908 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 BMT2Q1RMZ1 405 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 KIF19Q2TAC6 998 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 Q6ZNB5 142 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 CRYBG2Q8N1P7 616 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 C1orf216Q8TAB5 229 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 CRELD1Q96HD1 420 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.23■□□□□ 0.033e-9■■■■□ 23.6
SMC1A-204ENST00000463684 OSER1Q9NX31 292 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 ELOVL2Q9NXB9 296 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 NUDT5Q9UKK9 219 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 ANKRD6Q9Y2G4 727 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 SNX11Q9Y5W9 270 aa15.23■□□□□ 0.03
SMC1A-204ENST00000463684 A0A1W2PQH9 124 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 MDM4O15151 490 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 CYP26A1O43174 497 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 STC2O76061 302 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 PENKP01210 267 aaPredicted RBP15.22■□□□□ 0.03
SMC1A-204ENST00000463684 CYBBP04839 570 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 COPAP53621 1224 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 ASIC1P78348 528 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 ORC1Q13415 861 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 NCOA4Q13772 614 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 INAVAQ3KP66 663 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 FYB2Q5VWT5 728 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
SMC1A-204ENST00000463684 ANKS1BQ7Z6G8 1248 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 NELFCDQ8IXH7 590 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 PIP4K2CQ8TBX8 421 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 SLC39A7Q92504 469 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 DCLK3Q9C098 648 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 CIPCQ9C0C6 399 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 FAM49BQ9NUQ9 324 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 CGNQ9P2M7 1197 aaKnown RBP15.22■□□□□ 0.03
SMC1A-204ENST00000463684 NAGPAQ9UK23 515 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 PCDHA5Q9Y5H7 936 aa15.22■□□□□ 0.03
SMC1A-204ENST00000463684 TIMM44O43615 452 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 EXOC3O60645 756 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
SMC1A-204ENST00000463684 PRB1P04280 392 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 RALAP11233 206 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 PDCP20941 246 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 ADORA2BP29275 332 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 CASP4P49662 377 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 PSEN1P49768 467 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 CCT8P50990 548 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 NDST1P52848 882 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 COG7P83436 770 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 EIF4HQ15056 248 aaKnown RBP15.21■□□□□ 0.03
SMC1A-204ENST00000463684 PTPRNQ16849 979 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 SGSM1Q2NKQ1 1148 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 DHRS13Q6UX07 377 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 SERPINA13PQ6UXR4 307 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 LRRC69Q6ZNQ3 347 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 UNC93AQ86WB7 457 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms