RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 CLUHO75153 1309 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 FAM72CH0Y354 149 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 NCAM1P13591 858 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 GRK4P32298 578 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 APLP1P51693 650 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 FAM72AQ5TYM5 149 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 FAM72DQ6L9T8 149 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 CENPUQ71F23 418 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 FAM72BQ86X60 149 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 TP53INP2Q8IXH6 220 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 CCDC110Q8TBZ0 833 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 SERPINB12Q96P63 405 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 NCAPGQ9BPX3 1015 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 WDR6Q9NNW5 1121 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 LAMA2P24043 3122 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 ZNF487B1APH4 448 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ARVCFO00192 962 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 INPPL1O15357 1258 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 AVILO75366 819 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 TCEA3O75764 348 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ZBED1O96006 694 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 CHN1P15882 459 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 DEUP1Q05D60 604 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 KCNJ11Q14654 390 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 GLB1LQ6UWU2 654 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 PCGF5Q86SE9 256 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
VAPB-203ENST00000463370 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 RTP4Q96DX8 246 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 EPN3Q9H201 632 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 RAB6BQ9NRW1 208 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 EURLQ9NYK6 297 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 BCLAF3A2AJT9 711 aaKnown RBP13.29□□□□□ -0.28
VAPB-203ENST00000463370 CAPN9O14815 690 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 CREB3O43889 395 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 NBNO60934 754 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ABHD2P08910 425 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 SKIP12755 728 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 SSTR1P30872 391 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 CCT5P48643 541 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 PGFP49763 221 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 DSC1Q08554 894 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 EFTUD2Q15029 972 aaKnown RBP eCLIP13.29□□□□□ -0.28
VAPB-203ENST00000463370 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 RNF139Q8WU17 664 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
VAPB-203ENST00000463370 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 HCSTQ9UBK5 93 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 STAP1Q9ULZ2 295 aa13.29□□□□□ -0.28
VAPB-203ENST00000463370 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
VAPB-203ENST00000463370 MFSD11O43934 449 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 FBXO21O94952 628 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 LTFP02788 710 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 VAV1P15498 845 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 GATMP50440 423 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 FAM189BP81408 668 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 TCTN1Q2MV58 587 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 MRRFQ96E11 262 aaKnown RBP13.28□□□□□ -0.28
VAPB-203ENST00000463370 UROC1Q96N76 676 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 LGMNQ99538 433 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 SNX10Q9Y5X0 201 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 TSC2P49815 1807 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 A0A087WUV0 522 aaPredicted RBP13.28□□□□□ -0.28
VAPB-203ENST00000463370 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 E7ESA3 106 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 E7EVH7 732 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 METTL18O95568 372 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 ARL4CP56559 192 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 MPP2Q14168 576 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 STAT4Q14765 748 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 BBS9Q3SYG4 887 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 NOMO2Q5JPE7 1267 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 ATXN2LQ8WWM7 1075 aaKnown RBP13.28□□□□□ -0.28
VAPB-203ENST00000463370 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 DDIT4Q9NX09 232 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 RSPH14Q9UHP6 348 aa13.28□□□□□ -0.28
VAPB-203ENST00000463370 ZMYND8Q9ULU4 1186 aaPredicted RBP13.28□□□□□ -0.28
VAPB-203ENST00000463370 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 A6NNZ2 444 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms