RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 POLR2FP61218 127 aaKnown RBP13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 RING1Q06587 406 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 FAM217AQ8IXS0 508 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 C1orf131Q8NDD1 294 aaKnown RBP13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 PPP1R13BQ96KQ4 1090 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 SEMA4AQ9H3S1 761 aa13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 FAM207AQ9NSI2 230 aaPredicted RBP13.66□□□□□ -0.22
R3HDM1-213ENST00000463230 A0A0A0MRY4 1105 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 MDM4O15151 490 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 HOXA6P31267 233 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 MTAPQ13126 283 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 EFHC1Q5JVL4 640 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 ZC3H14Q6PJT7 736 aaKnown RBP13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 NUDT18Q6ZVK8 323 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 ATOH1Q92858 354 aaPredicted RBP13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 WBP2Q969T9 261 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 AZIN2Q96A70 460 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 PNKPQ96T60 521 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 CYTH4Q9UIA0 394 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 NUDT5Q9UKK9 219 aa13.65□□□□□ -0.22
R3HDM1-213ENST00000463230 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 E5RJQ4 531 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 PROB1E7EW31 1015 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 PAPSS1O43252 624 aaPredicted RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 IGLV3-27P01718 113 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 CCDC172P0C7W6 258 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 CORO1AP31146 461 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 NBL1P41271 181 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 NRLP54845 237 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 TOGARAM2Q6ZUX3 1019 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 UNC45BQ8IWX7 931 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 ETFBKMTQ8IXQ9 262 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 WDTC1Q8N5D0 677 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 EPS8L1Q8TE68 723 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 DDX1Q92499 740 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 NDRG1Q92597 394 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 NELL1Q92832 810 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 ACDQ96AP0 544 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 XPO6Q96QU8 1125 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 POPDC2Q9HBU9 364 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 CACNG3O60359 315 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 APODP05090 189 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 SP9P0CG40 484 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 GRIA2P42262 883 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 TNFRSF4P43489 277 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 CXCL12P48061 93 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 MTA1Q13330 715 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 SCUBE3Q8IX30 993 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 MAML2Q8IZL2 1156 aaPredicted RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 EDEM1Q92611 657 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 CBX8Q9HC52 389 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
R3HDM1-213ENST00000463230 FANCMQ8IYD8 2048 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 H0Y858 1186 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 HSF2BPO75031 334 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 EGFP01133 1207 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 PNMA6AP0CW24 399 aaPredicted RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 KLK7P49862 253 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 E2F5Q15329 346 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 FAM149B1Q96BN6 582 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 CPXM1Q96SM3 734 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 EDEM3Q9BZQ6 932 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 AGO1Q9UL18 857 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 CACNA1HO95180 2353 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 KLKB1P03952 638 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 NCAM1P13591 858 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 GABRB2P47870 512 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 MRPS21P82921 87 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 CDR2Q01850 454 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 SLC26A9Q7LBE3 791 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 NOP9Q86U38 636 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 TMEM25Q86YD3 366 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 PASD1Q8IV76 773 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 PHTF2Q8N3S3 785 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 SLC2A13Q96QE2 648 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 RBM12Q9NTZ6 932 aaKnown RBP13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 DEC1Q9P2X7 70 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 TLR6Q9Y2C9 796 aa13.63□□□□□ -0.23
R3HDM1-213ENST00000463230 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms