RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 DCAF17Q5H9S7 520 aaPredicted RBP6.34□□□□□ -1.39
COPS3-205ENST00000463097 PXKQ7Z7A4 578 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 IZUMO1Q8IYV9 350 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 METTL25Q8N6Q8 603 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 NKAIN3Q8N8D7 197 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 ZCCHC10Q8TBK6 192 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 OVCA2Q8WZ82 227 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 PIGSQ96S52 555 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 MPHOSPH9Q99550 1183 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 ZSWIM1Q9BR11 485 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 HERC2P3Q9BVR0 1158 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 RSPH9Q9H1X1 276 aaPredicted RBP6.34□□□□□ -1.39
COPS3-205ENST00000463097 SYNCQ9H7C4 482 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 SH3GLB2Q9NR46 395 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 DIAPH3Q9NSV4 1193 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 SEPT11Q9NVA2 429 aaKnown RBP6.34□□□□□ -1.39
COPS3-205ENST00000463097 FBXO28Q9NVF7 368 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 RCE1Q9Y256 329 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
COPS3-205ENST00000463097 USP15Q9Y4E8 981 aaPredicted RBP6.34□□□□□ -1.39
COPS3-205ENST00000463097 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 RUSC2Q8N2Y8 1516 aa6.34□□□□□ -1.39
COPS3-205ENST00000463097 PRAMEF33A0A0G2JMD5 474 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 A0A1W2PS29 197 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 AGAP5A6NIR3 686 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 MBD3L5A6NJ08 208 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 ZAR1LA6NP61 321 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 PRAMEF10O60809 474 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 WEE2P0C1S8 567 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 TNNT1P13805 278 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 CHN1P15882 459 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 PNPLA4P41247 253 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 FPGSQ05932 587 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 PTP4A2Q12974 167 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 TDGQ13569 410 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 WTAPQ15007 396 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 CD300EQ496F6 205 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D10BQ4KMP7 808 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 FAM90A2PQ658T7 463 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 ANKRD40Q6AI12 368 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 MICALCLQ6ZW33 695 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 ADGRG5Q8IZF4 528 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 FAM109AQ8N4B1 249 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 LSM14AQ8ND56 463 aaKnown RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 METTL6Q8TCB7 284 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 USP6NLQ92738 828 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 NELL1Q92832 810 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 OSBPL9Q96SU4 736 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 ARHGAP39Q9C0H5 1083 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 INTS2Q9H0H0 1204 aaKnown RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 SLC25A18Q9H1K4 315 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 ALDH8A1Q9H2A2 487 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 NRDE2Q9H7Z3 1164 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 PPP1R14DQ9NXH3 145 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 NKX1-2Q9UD57 310 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 RAB21Q9UL25 225 aa6.33□□□□□ -1.4
COPS3-205ENST00000463097 CNOT6Q9ULM6 557 aaKnown RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 UBE2J1Q9Y385 318 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
COPS3-205ENST00000463097 hCG_1807616A0A1W2PRN6 198 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 TMEM225BP0DP42 221 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 VDRP11473 427 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 ACP5P13686 325 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 PRKCHP24723 683 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 RGS2P41220 211 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 HARS2P49590 506 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 EIF4A1P60842 406 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 RPL15P61313 204 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 RPS7P62081 194 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 PPP2CBP62714 309 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 PPP2CAP67775 309 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 OCA2Q04671 838 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 TUBB3Q13509 450 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 ACVR2BQ13705 512 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 KCNJ12Q14500 433 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 SLC9A4Q6AI14 798 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 SLC22A25Q6T423 547 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 TAX1BP1Q86VP1 789 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 SNX19Q92543 992 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 DACT3Q96B18 629 aaPredicted RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 FAR2Q96K12 515 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 SLF1Q9BQI6 1058 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 BRF2Q9HAW0 419 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 KCNK9Q9NPC2 374 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 RXFP3Q9NSD7 469 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 ZDHHC7Q9NXF8 308 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 RNF181Q9P0P0 153 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 SLC25A10Q9UBX3 287 aaPredicted RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 TRPC5Q9UL62 973 aaPredicted RBP6.32□□□□□ -1.4
COPS3-205ENST00000463097 SUFUQ9UMX1 484 aa6.32□□□□□ -1.4
COPS3-205ENST00000463097 KDM3AQ9Y4C1 1321 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3DA0A087WVF3 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3IA0A087WXS9 549 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms