RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 NEDD8-MDP1E9PL57 170 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 RNF225M0QZC1 329 aaPredicted RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 O00370 1275 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 GFRA2O00451 464 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 BIN1O00499 593 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 DCLK1O15075 740 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 NPC1O15118 1278 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 MDM4O15151 490 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 TIMM44O43615 452 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ADAM23O75077 832 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CAVIN2O95810 425 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 AFPP02771 609 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 KLKB1P03952 638 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CYBBP04839 570 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 HNRNPLP14866 589 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 GBP1P32455 592 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 P2RY2P41231 377 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 DGKGP49619 791 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF132P52740 706 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 LIMK1P53667 647 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 STX17P56962 302 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 GCNT1Q02742 428 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 KDSRQ06136 332 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 PAK1Q13153 545 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 GOLGA7BQ2TAP0 167 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 PKDCCQ504Y2 493 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SPDYCQ5MJ68 293 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 C10orf76Q5T2E6 689 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 BSPRYQ5W0U4 402 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ANO7Q6IWH7 933 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SFTPA1Q8IWL2 248 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 PGBD3Q8N328 593 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 PPM1KQ8N3J5 372 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CPXM2Q8N436 756 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 C12orf50Q8NA57 414 aaPredicted RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 MDGA1Q8NFP4 955 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 UBA3Q8TBC4 463 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 RNF139Q8WU17 664 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SLC35F5Q8WV83 523 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 IRGQQ8WZA9 623 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 DDX1Q92499 740 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 PLD4Q96BZ4 506 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 HSFY1Q96LI6 401 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 FAM81BQ96LP2 452 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SLC2A11Q9BYW1 496 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ULBP1Q9BZM6 244 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CNGB3Q9NQW8 809 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ABCC13Q9NSE7 274 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CHMP5Q9NZZ3 219 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 RASAL2Q9UJF2 1139 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 AGO1Q9UL18 857 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 CTNND2Q9UQB3 1225 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 INVSQ9Y283 1065 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SLC27A6Q9Y2P4 619 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 HBS1LQ9Y450 684 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 NCOR2Q9Y618 2525 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 DCDC2BA2VCK2 349 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 PRRT4C9JH25 899 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 TULP2O00295 520 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 TRIM24O15164 1050 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 MAP3K13O43283 966 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 GDF9O60383 454 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 PENKP01210 267 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 HMBSP08397 361 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 CORO1AP31146 461 aaKnown RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 MPLP40238 635 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 DPP6P42658 865 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 HARS2P49590 506 aaKnown RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF445P59923 1031 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 CREB5Q02930 508 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 SF3A2Q15428 464 aaKnown RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 TRIP4Q15650 581 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 AASDHQ4L235 1098 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 FYB2Q5VWT5 728 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 PMS2CLQ68D20 193 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 PMF1Q6P1K2 205 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 SLC36A4Q6YBV0 504 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 RRAGAQ7L523 313 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 LPCAT2Q7L5N7 544 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 ENOSF1Q7L5Y1 443 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 BHLHA9Q7RTU4 235 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 DENND1CQ8IV53 801 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 SIX6OS1Q8N1H7 587 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 MLKLQ8NB16 471 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 UCMAQ8WVF2 138 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 TFAP2BQ92481 460 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 NDRG1Q92597 394 aaKnown RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 SPACA7Q96KW9 195 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 IRX2Q9BZI1 471 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 TPSD1Q9BZJ3 242 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 UBE2TQ9NPD8 197 aaPredicted RBP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 BCCIPQ9P287 314 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 RWDD2AQ9UIY3 292 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 HCN2Q9UL51 889 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTPRF-210ENST00000463041 CNTN6Q9UQ52 1028 aa7.62□□□□□ -1.19
PTPRF-210ENST00000463041 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms