RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FAM163BP0C2L3 166 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 KRT13P13646 458 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 GABRG2P18507 467 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 YWHAQP27348 245 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 GTF2H1P32780 548 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 PPP1R2P41236 205 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TNFRSF4P43489 277 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 MAPK8P45983 427 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 MXI1P50539 228 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TUBP50607 506 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC5A3P53794 718 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 STX17P56962 302 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 IFRD2Q12894 506 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 LMAN2Q12907 356 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 PAK1Q13153 545 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 SEMA3BQ13214 749 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 STIM1Q13586 685 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZNF667Q5HYK9 610 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 SPDYCQ5MJ68 293 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 LYSMD4Q5XG99 296 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 NUP93Q8N1F7 819 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TERB1Q8NA31 727 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZMIZ2Q8NF64 920 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 OR6B3Q8NGW1 331 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 FBXO32Q969P5 355 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC35C1Q96A29 364 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 P2RY11Q96G91 374 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TWNKQ96RR1 684 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 KCNK16Q96T55 309 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 SNX25Q9H3E2 840 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 POLMQ9NP87 494 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 CD93Q9NPY3 652 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 GMIPQ9P107 970 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TBC1D14Q9P2M4 693 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 IGHV1OR15-9A0A0B4J2B8 117 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SPAARA0A1B0GVQ0 90 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 TMEM8BA6NDV4 472 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SRRM3A6NNA2 597 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 A8MXQ7 604 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 BEST1O76090 585 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 RTN3O95197 1032 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 CAPNS1P04632 268 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 HOXD12P35452 270 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 MARSP56192 900 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 FAM193AP78312 1265 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 GAD2Q05329 585 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 INCA1Q0VD86 236 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 ORC1Q13415 861 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SGSM1Q2NKQ1 1148 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 DCAF17Q5H9S7 520 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 HECTD3Q5T447 861 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 KRT39Q6A163 491 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 TMEM25Q86YD3 366 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC41A1Q8IVJ1 513 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 FUKQ8N0W3 1084 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 PDZD8Q8NEN9 1154 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 OR2I1PQ8NGU4 316 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZCCHC14Q8WYQ9 949 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 TAF4BQ92750 862 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 OTUB2Q96DC9 234 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 ACOX2Q99424 681 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SMOQ99835 787 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 NUSAP1Q9BXS6 441 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 NIF3L1Q9GZT8 377 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 NUP62CLQ9H1M0 184 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 SPHK2Q9NRA0 654 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 KRT82Q9NSB4 513 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 CALCOCO1Q9P1Z2 691 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 BCCIPQ9P287 314 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 KLK13Q9UKR3 277 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 COQ4Q9Y3A0 265 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 NEUROG3Q9Y4Z2 214 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 ATMQ13315 3056 aa8.36□□□□□ -1.07
CDC42BPA-210ENST00000462553 PLXNA2O75051 1894 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CACNG3O60359 315 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CILPO75339 1184 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 GJB3O75712 270 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CFIP05156 583 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 IRF1P10914 325 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CCDC130P13994 396 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 HOXB2P14652 356 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 NDUFV2P19404 249 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 DPP6P42658 865 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 WASP42768 502 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 NDST1P52848 882 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 RPL6Q02878 288 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 DPCR1Q3MIW9 517 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms