RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 I3L4J1 428 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 RFPL1O75677 317 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 KRT38O76015 456 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 HOXA11P31270 313 aaPredicted RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 MAGEA6P43360 314 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 MRPS5P82675 430 aaKnown RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 TMPRSS15P98073 1019 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 DPYSL2Q16555 572 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 HEATR6Q6AI08 1181 aaKnown RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 ZNF534Q76KX8 674 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 ZDHHC17Q8IUH5 632 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 CCDC185Q8N715 623 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 MCUQ8NE86 351 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 SHCBP1Q8NEM2 672 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 GSDMBQ8TAX9 411 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 SNX27Q96L92 541 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 KCTD15Q96SI1 283 aaPredicted RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.52■□□□□ 0.4
ACTB-207ENST00000462494 CYB561D2O14569 222 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 HNRNPCL1O60812 293 aaKnown RBP17.52■□□□□ 0.4
ACTB-207ENST00000462494 CCDC22O60826 627 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 GCATO75600 419 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 CALB2P22676 271 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 AMPD1P23109 780 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 AKAP5P24588 427 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 LMO2P25791 158 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 GJA5P36382 358 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 SLC27A1Q6PCB7 646 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 DENND5BQ6ZUT9 1274 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 TTC7BQ86TV6 843 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 ZNF410Q86VK4 478 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 PYROXD2Q8N2H3 581 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 STK32AQ8WU08 396 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 SKA1Q96BD8 255 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 LRRC39Q96DD0 335 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 NSL1Q96IY1 281 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 SIGLEC10Q96LC7 697 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 CSPG4P5Q96PW8 444 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 EBNA1BP2Q99848 306 aaKnown RBP17.52■□□□□ 0.4
ACTB-207ENST00000462494 CADM1Q9BY67 442 aaKnown RBP17.52■□□□□ 0.4
ACTB-207ENST00000462494 TRIM6Q9C030 488 aaPredicted RBP17.52■□□□□ 0.4
ACTB-207ENST00000462494 PLEKHA5Q9HAU0 1116 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 CDHR5Q9HBB8 845 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
ACTB-207ENST00000462494 KITP10721 976 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 ZFXP17010 805 aaPredicted RBP17.52■□□□□ 0.39
ACTB-207ENST00000462494 PTPN9P43378 593 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 BST2Q10589 180 aaKnown RBP17.52■□□□□ 0.39
ACTB-207ENST00000462494 CHI3L2Q15782 390 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 CASC4Q6P4E1 433 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 RFWD3Q6PCD5 774 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 NDUFAF2Q8N183 169 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 NETO2Q8NC67 525 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 PTCD3Q96EY7 689 aaKnown RBP17.52■□□□□ 0.39
ACTB-207ENST00000462494 BTBD10Q9BSF8 475 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.39
ACTB-207ENST00000462494 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.39
ACTB-207ENST00000462494 SLC5A4Q9NY91 659 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 ARMCX1Q9P291 453 aa17.52■□□□□ 0.39
ACTB-207ENST00000462494 GYG2O15488 501 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 GOT1P17174 413 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 BST1Q10588 318 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 SNAPC2Q13487 334 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 WASHC2DQ5SRD0 308 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 C9orf57Q5W0N0 161 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 ALYREFQ86V81 257 aaKnown RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 NUDCD3Q8IVD9 361 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 OXNAD1Q96HP4 312 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 OSMRQ99650 979 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 TUBB6Q9BUF5 446 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 PIH1D1Q9NWS0 290 aaKnown RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 MTMR10Q9NXD2 777 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 KLK14Q9P0G3 267 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 DERAQ9Y315 318 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 SYNJ2BP-COX16A0A087WUM0 186 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 TPBGLP0DKB5 382 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 ESRRAP11474 423 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 CDC25CP30307 473 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 GNL1P36915 607 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 MAGEA3P43357 314 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 NR2C2P49116 596 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 BCAT1P54687 386 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 CCNA1P78396 465 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 CRADDP78560 199 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 ZNF618Q5T7W0 954 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 SLC26A9Q7LBE3 791 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 UNC93AQ86WB7 457 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 LRRC52Q8N7C0 313 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 ANKRD52Q8NB46 1076 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 NDRG1Q92597 394 aaKnown RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 EMID1Q96A84 441 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 QKIQ96PU8 341 aaKnown RBP eCLIP17.51■□□□□ 0.39
ACTB-207ENST00000462494 GCOM2Q9BZD3 368 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 TLE6Q9H808 572 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms