RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 C16orf45Q96MC5 204 aaPredicted RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 IGFLR1Q9H665 355 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 PRDM16Q9HAZ2 1276 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 OSER1Q9NX31 292 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
RTF1-202ENST00000462276 DNMT3BQ9UBC3 853 aaKnown RBP11.12□□□□□ -0.63
RTF1-202ENST00000462276 RNF14Q9UBS8 474 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 USP18Q9UMW8 372 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TRANK1O15050 2925 aa11.12□□□□□ -0.63
RTF1-202ENST00000462276 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 ZNF487B1APH4 448 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 MDM4O15151 490 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 IRAK2O43187 625 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 OLFM2O95897 454 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 MYL4P12829 197 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 HDCP19113 662 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 IGFBP4P22692 258 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 SSR1P43307 286 aaKnown RBP11.11□□□□□ -0.63
RTF1-202ENST00000462276 HDAC4P56524 1084 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 RWDD2BP57060 319 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 COPS2P61201 443 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 SLC7A9P82251 487 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 SCAPQ12770 1279 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 ADGRE1Q14246 886 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
RTF1-202ENST00000462276 ODF2Q5BJF6 829 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 PAPD7Q5XG87 772 aaKnown RBP11.11□□□□□ -0.63
RTF1-202ENST00000462276 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 SYT10Q6XYQ8 523 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 TAC4Q86UU9 113 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTF1-202ENST00000462276 KATNAL2Q8IYT4 538 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 PBKQ96KB5 322 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 WDR24Q96S15 920 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 TLR10Q9BXR5 811 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 CARD9Q9H257 536 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 ZNF334Q9HCZ1 680 aaPredicted RBP11.11□□□□□ -0.63
RTF1-202ENST00000462276 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
RTF1-202ENST00000462276 MRPS23Q9Y3D9 190 aaKnown RBP11.11□□□□□ -0.63
RTF1-202ENST00000462276 MYO9BQ13459 2157 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 KIAA1671Q9BY89 1806 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 COCHO43405 550 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 TADA3O75528 432 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 ZRANB2O95218 330 aaKnown RBP eCLIP11.1□□□□□ -0.63
RTF1-202ENST00000462276 LATS1O95835 1130 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 GLP2RO95838 553 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 FTCDO95954 541 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 IGLV3-27P01718 113 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 APOEP02649 317 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 HTR7P34969 479 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 ADRA1BP35368 520 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 MTHFRP42898 656 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 HARS2P49590 506 aaKnown RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 PGFP49763 221 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 PEX5P50542 639 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 TBX4P57082 545 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 EFEMP1Q12805 493 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 NME3Q13232 169 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 PDK2Q15119 407 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 CDO1Q16878 200 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 C15orf59Q2T9L4 293 aaPredicted RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 PRSS36Q5K4E3 855 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 SCYL2Q6P3W7 929 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 SYCE2Q6PIF2 218 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 TMC5Q6UXY8 1006 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 ARFGAP1Q8N6T3 406 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 EXD1Q8NHP7 514 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 RNF34Q969K3 372 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 SLC39A13Q96H72 371 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 C1orf74Q96LT6 269 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 OSBPL2Q9H1P3 480 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 CCSER2Q9H7U1 834 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 PIGVQ9NUD9 493 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 DONSONQ9NYP3 566 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 GDE1Q9NZC3 331 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 RCOR3Q9P2K3 495 aaPredicted RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 EFR3BQ9Y2G0 817 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms