RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ZNF699Q32M78 642 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 FAM26FQ5R3K3 315 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 DCAF12L1Q5VU92 463 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 CNNM4Q6P4Q7 775 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 KLHDC10Q6PID8 442 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 SCARA5Q6ZMJ2 495 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 ACOT1Q86TX2 421 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 C12orf56Q8IXR9 622 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 CRYBG2Q8N1P7 616 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 C1orf216Q8TAB5 229 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
CBX3-205ENST00000462165 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 MKRN2Q9H000 416 aaKnown RBP11.44□□□□□ -0.58
CBX3-205ENST00000462165 SDCBP2Q9H190 292 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 IL21RQ9HBE5 538 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 OSER1Q9NX31 292 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 THAP10Q9P2Z0 257 aaPredicted RBP11.44□□□□□ -0.58
CBX3-205ENST00000462165 SCML2Q9UQR0 700 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 PCDHGB2Q9Y5G2 931 aa11.44□□□□□ -0.58
CBX3-205ENST00000462165 KALRNO60229 2985 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 TP53BP1Q12888 1972 aaPredicted RBP11.43□□□□□ -0.58
CBX3-205ENST00000462165 SHROOM3Q8TF72 1996 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 GOLGA4Q13439 2230 aaKnown RBP11.43□□□□□ -0.58
CBX3-205ENST00000462165 METTL12A8MUP2 240 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 FLRT2O43155 660 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CYP26A1O43174 497 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CASP4P49662 377 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 ASIC1P78348 528 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 AMPD3Q01432 767 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 EHHADHQ08426 723 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CUL4AQ13619 759 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 NCOA4Q13772 614 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 E2F4Q16254 413 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 HLA-BQ31612 363 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 FYB2Q5VWT5 728 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 GPRIN1Q7Z2K8 1008 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 NELFCDQ8IXH7 590 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 PLEKHO2Q8TD55 490 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 SLC2A14Q8TDB8 520 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 BHMTQ93088 406 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 SIPA1Q96FS4 1042 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 P2RY11Q96G91 374 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CDC6Q99741 560 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 NUP58Q9BVL2 599 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CUEDC2Q9H467 287 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 NMUR1Q9HB89 426 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.43□□□□□ -0.583e-9■□□□□ 9.1
CBX3-205ENST00000462165 PLK2Q9NYY3 685 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
CBX3-205ENST00000462165 DNMT3LQ9UJW3 386 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 FNDC3AQ9Y2H6 1198 aaKnown RBP11.43□□□□□ -0.58
CBX3-205ENST00000462165 SETXQ7Z333 2677 aaKnown RBP11.43□□□□□ -0.58
CBX3-205ENST00000462165 CABIN1Q9Y6J0 2220 aa11.43□□□□□ -0.58
CBX3-205ENST00000462165 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 LRRIQ3A6PVS8 624 aaPredicted RBP11.42□□□□□ -0.58
CBX3-205ENST00000462165 HHLA1C9JL84 531 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 MDM4O15151 490 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 VNN1O95497 513 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PENKP01210 267 aaPredicted RBP11.42□□□□□ -0.58
CBX3-205ENST00000462165 C4BPAP04003 597 aaKnown RBP11.42□□□□□ -0.58
CBX3-205ENST00000462165 ATXN1LP0C7T5 689 aaKnown RBP11.42□□□□□ -0.58
CBX3-205ENST00000462165 FAM200BP0CF97 657 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 RARGP13631 454 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 P4HA1P13674 534 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 NDST1P52848 882 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 COPAP53621 1224 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 MFAP3P55082 362 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 CLDN10P78369 228 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 BIRC3Q13489 604 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 E2F5Q15329 346 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 GEN1Q17RS7 908 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 TMPRSS6Q8IU80 811 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 GALNT15Q8N3T1 639 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 ZNF276Q8N554 614 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 C12orf29Q8N999 325 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 RHBDD1Q8TEB9 315 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 UCMAQ8WVF2 138 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
CBX3-205ENST00000462165 LRIG1Q96JA1 1093 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PCED1AQ9H1Q7 454 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PNPLA8Q9NP80 782 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 ZNF510Q9Y2H8 683 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 PCDHA5Q9Y5H7 936 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 NUMA1Q14980 2115 aa11.42□□□□□ -0.58
CBX3-205ENST00000462165 KNL1Q8NG31 2342 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 A0A087WV48 116 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 TRABD2BA6NFA1 517 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 SYNCRIPO60506 623 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 EXOC3O60645 756 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 STC2O76061 302 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 CLSTN1O94985 981 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 KLKB1P03952 638 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms