RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PKDCCQ504Y2 493 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 PPM1KQ8N3J5 372 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 KCTD13Q8WZ19 329 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 KAT5Q92993 513 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 P2RY11Q96G91 374 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 SRRTQ9BXP5 876 aaKnown RBP19.86■□□□□ 0.77
VARS-220ENST00000461874 FBXO10Q9UK96 956 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 STRIP2Q9ULQ0 834 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 PCDHB4Q9Y5E5 795 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 RALGAPA1Q6GYQ0 2036 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 RNF225M0QZC1 329 aaPredicted RBP19.85■□□□□ 0.77
VARS-220ENST00000461874 CORO1AP31146 461 aaKnown RBP19.85■□□□□ 0.77
VARS-220ENST00000461874 CHKAP35790 457 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 ADIGQ0VDE8 80 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 KCNH2Q12809 1159 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 PMS2CLQ68D20 193 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 TOGARAM2Q6ZUX3 1019 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 TRIML1Q8N9V2 468 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 C12orf50Q8NA57 414 aaPredicted RBP19.85■□□□□ 0.77
VARS-220ENST00000461874 EHBP1Q8NDI1 1231 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 BHMTQ93088 406 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 IPO9Q96P70 1041 aaKnown RBP19.85■□□□□ 0.77
VARS-220ENST00000461874 VPS45Q9NRW7 570 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 PLK2Q9NYY3 685 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 AGO1Q9UL18 857 aaKnown RBP19.85■□□□□ 0.77
VARS-220ENST00000461874 ABCA7Q8IZY2 2146 aa19.85■□□□□ 0.77
VARS-220ENST00000461874 TCRBV21S2A2A0A5A6 115 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 SLC12A8A0AV02 714 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 BCLAF3A2AJT9 711 aaKnown RBP19.84■□□□□ 0.77
VARS-220ENST00000461874 PRRT4C9JH25 899 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 PENKP01210 267 aaPredicted RBP19.84■□□□□ 0.77
VARS-220ENST00000461874 BCKDHBP21953 392 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 NTSR1P30989 418 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 DGKGP49619 791 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 UBE2HP62256 183 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 GCNT1Q02742 428 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 CREB5Q02930 508 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 CNGA2Q16280 664 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 AASDHQ4L235 1098 aaPredicted RBP19.84■□□□□ 0.77
VARS-220ENST00000461874 EGFLAMQ63HQ2 1017 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 RRAGAQ7L523 313 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 DENND1CQ8IV53 801 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 SIX6OS1Q8N1H7 587 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 SCML4Q8N228 414 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 SLC35F5Q8WV83 523 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 HMGB4Q8WW32 186 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 ZSWIM1Q9BR11 485 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 SMOC1Q9H4F8 434 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 CNGB3Q9NQW8 809 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 OLA1Q9NTK5 396 aaKnown RBP19.84■□□□□ 0.77
VARS-220ENST00000461874 KIAA1468Q9P260 1216 aa19.84■□□□□ 0.77
VARS-220ENST00000461874 BCCIPQ9P287 314 aaKnown RBP eCLIP19.84■□□□□ 0.77
VARS-220ENST00000461874 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.84■□□□□ 0.77
VARS-220ENST00000461874 YJEFN3A6XGL0 299 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 E7ENQ6 273 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 AFPP02771 609 aaKnown RBP19.83■□□□□ 0.77
VARS-220ENST00000461874 P2RY2P41231 377 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 LIMK1P53667 647 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 FYB2Q5VWT5 728 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 BSPRYQ5W0U4 402 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 ARHGEF19Q8IW93 802 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 RBBP8NLQ8NC74 664 aaPredicted RBP19.83■□□□□ 0.77
VARS-220ENST00000461874 RLN3Q8WXF3 142 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 PLD4Q96BZ4 506 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 ACOX2Q99424 681 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 RXFP3Q9NSD7 469 aa19.83■□□□□ 0.77
VARS-220ENST00000461874 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.83■□□□□ 0.77
VARS-220ENST00000461874 A0A1W2PQF6 199 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 GABBR2O75899 941 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 FGFR1OPO95684 399 aaKnown RBP19.82■□□□□ 0.76
VARS-220ENST00000461874 CAVIN2O95810 425 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 LCP1P13796 627 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 HOXB2P14652 356 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 BRD2P25440 801 aaKnown RBP19.82■□□□□ 0.76
VARS-220ENST00000461874 WASP42768 502 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 ZNF132P52740 706 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 STILQ15468 1287 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 TRIP4Q15650 581 aaPredicted RBP19.82■□□□□ 0.76
VARS-220ENST00000461874 CAMK4Q16566 473 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 MAP7D1Q3KQU3 841 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 SDE2Q6IQ49 451 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 PMF1Q6P1K2 205 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 FMNL3Q8IVF7 1028 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 CHPFQ8IZ52 775 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 PGBD3Q8N328 593 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 CPXM2Q8N436 756 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 RNF139Q8WU17 664 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 EDEM1Q92611 657 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 SPACA7Q96KW9 195 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 KREMEN1Q96MU8 473 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 INTS2Q9H0H0 1204 aaKnown RBP19.82■□□□□ 0.76
VARS-220ENST00000461874 SLC27A6Q9Y2P4 619 aa19.82■□□□□ 0.76
VARS-220ENST00000461874 CNOT1A5YKK6 2376 aaKnown RBP19.81■□□□□ 0.76
VARS-220ENST00000461874 M0QYV0 167 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 CALCAP01258 141 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 RGS7P49802 495 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 DAOAP59103 153 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 BYSLQ13895 437 aaKnown RBP19.81■□□□□ 0.76
VARS-220ENST00000461874 FAM217AQ8IXS0 508 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 GABRG3Q99928 467 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms