RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TYRP14679 529 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 CHKAP35790 457 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 P2RY2P41231 377 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 TKTL1P51854 596 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 MARSP56192 900 aaKnown RBP9.61□□□□□ -0.87
BRCA1-207ENST00000461798 KDSRQ06136 332 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 PDE4CQ08493 712 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 CNGA2Q16280 664 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 SGO2Q562F6 1265 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 SPDYCQ5MJ68 293 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 PMS2CLQ68D20 193 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 ISM2Q6H9L7 571 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 GRAMD4Q6IC98 578 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 ANO7Q6IWH7 933 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 LCLAT1Q6UWP7 414 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 BHLHA9Q7RTU4 235 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 MDGA1Q8NFP4 955 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 CD248Q9HCU0 757 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 NUDT5Q9UKK9 219 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 TSPAN16Q9UKR8 245 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 SLC27A6Q9Y2P4 619 aa9.61□□□□□ -0.87
BRCA1-207ENST00000461798 A0A1W2PQF6 199 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 PRRT4C9JH25 899 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TULP2O00295 520 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 GFRA2O00451 464 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 CAVIN2O95810 425 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 SETSIPP0DME0 302 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 NTSR1P30989 418 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 MPLP40238 635 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 BCAT1P54687 386 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 GCNT1Q02742 428 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 BST2Q10589 180 aaKnown RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 CETN1Q12798 172 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 EFEMP1Q12805 493 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 BYSLQ13895 437 aaKnown RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 SF3A2Q15428 464 aaKnown RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TRIP4Q15650 581 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 GOLGA7BQ2TAP0 167 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 C10orf76Q5T2E6 689 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TPGS1Q6ZTW0 290 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 MIB1Q86YT6 1006 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TRIM59Q8IWR1 403 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 CPXM2Q8N436 756 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 ZNF513Q8N8E2 541 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TRIML1Q8N9V2 468 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 C12orf50Q8NA57 414 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 SLC35F5Q8WV83 523 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 NELFBQ8WX92 580 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 DDX1Q92499 740 aaKnown RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 P2RY11Q96G91 374 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 NT5C1BQ96P26 610 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 TPSD1Q9BZJ3 242 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 ULBP1Q9BZM6 244 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 LRRC4Q9HBW1 653 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 DNAJC17Q9NVM6 304 aaKnown RBP9.6□□□□□ -0.87
BRCA1-207ENST00000461798 MARCH2Q9P0N8 246 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 HESX1Q9UBX0 185 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 STOML2Q9UJZ1 356 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
BRCA1-207ENST00000461798 RNF225M0QZC1 329 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-207ENST00000461798 NPC1O15118 1278 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 CD19P15391 556 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 BCKDHBP21953 392 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 GBP1P32455 592 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 DGKGP49619 791 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 ZNF132P52740 706 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 LRMPQ12912 555 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 STILQ15468 1287 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 CCDC40Q4G0X9 1142 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 AASDHQ4L235 1098 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-207ENST00000461798 BSPRYQ5W0U4 402 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 EGFLAMQ63HQ2 1017 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 SMYD5Q6GMV2 418 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 SDE2Q6IQ49 451 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 KLHL10Q6JEL2 608 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 TMEM270Q6UE05 265 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 TOGARAM2Q6ZUX3 1019 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 UBA3Q8TBC4 463 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 TFAP2BQ92481 460 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 GABRG3Q99928 467 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 ZSWIM1Q9BR11 485 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 SLC2A11Q9BYW1 496 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 CNGB3Q9NQW8 809 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 RXFP3Q9NSD7 469 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 ABCC13Q9NSE7 274 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 OLA1Q9NTK5 396 aaKnown RBP9.59□□□□□ -0.87
BRCA1-207ENST00000461798 RASAL2Q9UJF2 1139 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 AGO1Q9UL18 857 aaKnown RBP9.59□□□□□ -0.87
BRCA1-207ENST00000461798 CNTN6Q9UQ52 1028 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 INVSQ9Y283 1065 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 HBS1LQ9Y450 684 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms