RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CAPN12Q6ZSI9 719 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RTN4RL1Q86UN2 441 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MON1AQ86VX9 555 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CHSY1Q86X52 802 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PSTKQ8IV42 348 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP6V0D2Q8N8Y2 350 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 OLIG1Q8TAK6 271 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 FBXO25Q8TCJ0 367 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 GIPC2Q8TF65 315 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 LINC01599Q8WXQ3 324 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ARMC5Q96C12 935 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PIWIL1Q96J94 861 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PKNOX2Q96KN3 472 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 B3GALT6Q96L58 329 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TMEM121Q9BTD3 319 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CATSPERBQ9H7T0 1116 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PRDM16Q9HAZ2 1276 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PNPLA8Q9NP80 782 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SAYSD1Q9NPB0 183 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RAB6BQ9NRW1 208 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 OLA1Q9NTK5 396 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 WHRNQ9P202 907 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TXNDC16Q9P2K2 825 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TMEM59LQ9UK28 342 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TPX2Q9ULW0 747 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 NAALADL1Q9UQQ1 740 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PLAAQ9Y263 795 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 R3HDM2Q9Y2K5 976 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC27A5Q9Y2P5 690 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MAD1L1Q9Y6D9 718 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 GOLGA8MH3BSY2 632 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SMAPO00193 183 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MTSS1O43312 755 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 OAZ2O95190 189 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CPP00450 1065 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 HSPA8P11142 646 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 AMPD1P23109 780 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 IL1R2P27930 398 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 HPDP32754 393 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ADRA1BP35368 520 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RPL21P46778 160 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 NR2C2P49116 596 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 AARSP49588 968 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PSEN1P49768 467 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 RABGGTBP53611 331 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TBX4P57082 545 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC25A11Q02978 314 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CREMQ03060 361 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 FPGSQ05932 587 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PTK6Q13882 451 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 UAP1Q16222 522 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 HIF1AQ16665 826 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SH3PXD2AQ5TCZ1 1133 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TXNRD3NBQ6F5E7 133 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ITPRIPL1Q6GPH6 555 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PSRC1Q6PGN9 363 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 PRSS55Q6UWB4 352 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 C4orf22Q6V702 233 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 C7orf61Q8IZ16 206 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 BBS5Q8N3I7 341 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 C12orf50Q8NA57 414 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CMASQ8NFW8 434 aaPredicted RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 DQX1Q8TE96 717 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 AENQ8WTP8 325 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 C2orf15Q8WU43 125 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TFB1MQ8WVM0 346 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 DPF3Q92784 378 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CAVIN3Q969G5 261 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 CDK5RAP1Q96SZ6 601 aaKnown RBP4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SELENOSQ9BQE4 189 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 FUT8Q9BYC5 575 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 GPR62Q9BZJ7 368 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 UBXN6Q9BZV1 441 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TKTL2Q9H0I9 626 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 ENTPD7Q9NQZ7 604 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 MARCH2Q9P0N8 246 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 NUDT5Q9UKK9 219 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 TBX21Q9UL17 535 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC4A7Q9Y6M7 1214 aa4.27□□□□□ -1.73
ATP13A3-206ENST00000461660 F8W810 466 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 RNF40O75150 1001 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 TIMP1P01033 207 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 LRG1P02750 347 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 APRTP07741 180 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 CSH1P0DML2 217 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 CSH2P0DML3 217 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 CTNNB1P35222 781 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 HARS2P49590 506 aaKnown RBP4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 KPNA1P52294 538 aaPredicted RBP4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 AIF1P55008 147 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 DRG2P55039 364 aaKnown RBP4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 HDAC4P56524 1084 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 ADCY1Q08828 1119 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF252P-AS1Q0IIN9 211 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 CYP1B1Q16678 543 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 PKDCCQ504Y2 493 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKRD20A8PQ5CZ79 823 aa4.26□□□□□ -1.73
ATP13A3-206ENST00000461660 DUPD1Q68J44 220 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms