RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	SMPD4	Q9NXE4	827 aa		10.63	□□□□□ -0.71
SMIM7-204	ENST00000461488	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
SMIM7-204	ENST00000461488	TBC1D14	Q9P2M4	693 aa		10.63	□□□□□ -0.71
SMIM7-204	ENST00000461488	NUDT5	Q9UKK9	219 aa		10.63	□□□□□ -0.71
SMIM7-204	ENST00000461488	SCIN	Q9Y6U3	715 aa		10.63	□□□□□ -0.71
SMIM7-204	ENST00000461488	SLC12A8	A0AV02	714 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	SIGLEC16	A6NMB1	481 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TMCO5B	A8MYB1	307 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	MDM4	O15151	490 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	IRAK2	O43187	625 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	STC2	O76061	302 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	LATS1	O95835	1130 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TRUB2	O95900	331 aa	Known RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TBX18	O95935	607 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	FTL	P02792	175 aa	Predicted RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	FYN	P06241	537 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	IRF1	P10914	325 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	GDI1	P31150	447 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	CYLC1	P35663	651 aa	Predicted RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	GRM2	Q14416	872 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	ASTE1	Q2TB18	679 aa	Predicted RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	C2CD6	Q53TS8	623 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	DCAF6	Q58WW2	860 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	CCDC122	Q5T0U0	273 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	NUGGC	Q68CJ6	796 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	HTR3D	Q70Z44	454 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	MIB1	Q86YT6	1006 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TMTC1	Q8IUR5	882 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	UNC45B	Q8IWX7	931 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	CCDC170	Q8IYT3	715 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	SPC24	Q8NBT2	197 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	OSCP1	Q8WVF1	389 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	ZNF653	Q96CK0	615 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	RPP25	Q9BUL9	199 aa	Known RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	DDX23	Q9BUQ8	820 aa	Known RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	FAM204A	Q9H8W3	233 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	MRPL47	Q9HD33	250 aa	Known RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	CD320	Q9NPF0	282 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	LUC7L	Q9NQ29	371 aa	Known RBP	10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	PARVA	Q9NVD7	372 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TAS2R14	Q9NYV8	317 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	CFAP97	Q9P2B7	532 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TMEM59L	Q9UK28	342 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	NENF	Q9UMX5	172 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	NAALADL1	Q9UQQ1	740 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	TLR6	Q9Y2C9	796 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	PAXBP1	Q9Y5B6	917 aa		10.62	□□□□□ -0.71
SMIM7-204	ENST00000461488	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	CHD5	Q8TDI0	1954 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	TCRBV5S1A1T	A0A578	114 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	DCX	O43602	365 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	GRAP2	O75791	330 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	NFATC1	O95644	943 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	F9	P00740	461 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	IGLV3-25	P01717	112 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	IGLV3-27	P01718	113 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SLC2A3	P11169	496 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	KRT3	P12035	628 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	ALAD	P13716	330 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SDC4	P31431	198 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	PTPN9	P43378	593 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	HARS2	P49590	506 aa	Known RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	MLLT6	P55198	1093 aa	Predicted RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	TBX4	P57082	545 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	RNASE9	P60153	205 aa	Known RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	NR1H3	Q13133	447 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	GSE1	Q14687	1217 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	TAF5	Q15542	800 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SLC25A52	Q3SY17	297 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	C10orf76	Q5T2E6	689 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SYPL2	Q5VXT5	272 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	PLEKHA7	Q6IQ23	1121 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	2e-6	■□□□□ 10.1
SMIM7-204	ENST00000461488	TAC4	Q86UU9	113 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	CPA6	Q8N4T0	437 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	CSGALNACT1	Q8TDX6	532 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	ATP2A3	Q93084	1043 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	NT5C3B	Q969T7	300 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	PGAP3	Q96FM1	320 aa	Predicted RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	MSANTD3	Q96H12	275 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	NPY6R	Q99463	290 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	CHP1	Q99653	195 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	IRX2	Q9BZI1	471 aa	Predicted RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	GKN1	Q9NS71	199 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	DUS2	Q9NX74	493 aa	Known RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	CNOT8	Q9UFF9	292 aa	Known RBP	10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	SFMBT1	Q9UHJ3	866 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	MUTYH	Q9UIF7	546 aa		10.61	□□□□□ -0.71
SMIM7-204	ENST00000461488	C2CD4B	A6NLJ0	364 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	NARS	O43776	548 aa	Known RBP	10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	IPO7	O95373	1038 aa	Known RBP	10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	APOE	P02649	317 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	HMBS	P08397	361 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	H2AFZ	P0C0S5	128 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	GLUL	P15104	373 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	PDGFRA	P16234	1089 aa		10.6	□□□□□ -0.71
SMIM7-204	ENST00000461488	GPD1	P21695	349 aa		10.6	□□□□□ -0.71

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