RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 TAC4Q86UU9 113 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 MFSD6LQ8IWD5 586 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 SLC44A3Q8N4M1 653 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 ADAM32Q8TC27 787 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 E2F7Q96AV8 911 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 ZNF653Q96CK0 615 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 NACA2Q9H009 215 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 PARVAQ9NVD7 372 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSBP1-202ENST00000461433 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
SSBP1-202ENST00000461433 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-202ENST00000461433 VCANP13611 3396 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 SLC12A8A0AV02 714 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
SSBP1-202ENST00000461433 STC2O76061 302 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 NDUFA10O95299 355 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 TRUB2O95900 331 aaKnown RBP11.76□□□□□ -0.53
SSBP1-202ENST00000461433 IGLV3-27P01718 113 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 KLKB1P03952 638 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 CYP1A2P05177 515 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 MYBL1P10243 752 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 OGDHQ02218 1023 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 TRIP4Q15650 581 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-202ENST00000461433 DNAJC24Q6P3W2 148 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 GJD3Q8N144 294 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 BPIFB1Q8TDL5 484 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 RXFP2Q8WXD0 754 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 SLC39A13Q96H72 371 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 CFAP57Q96MR6 1250 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
SSBP1-202ENST00000461433 SELENOOQ9BVL4 669 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 CFAP97Q9P2B7 532 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 MYO1AQ9UBC5 1043 aa11.76□□□□□ -0.53
SSBP1-202ENST00000461433 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
SSBP1-202ENST00000461433 COL4A2P08572 1712 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 TMEM191CA6NGB0 347 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 DPYSL4O14531 572 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 IRAK2O43187 625 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 H2AFZP0C0S5 128 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 IRF1P10914 325 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 PSMC3P17980 439 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 GPC5P78333 572 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 COG7P83436 770 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 NNTQ13423 1086 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 GRM2Q14416 872 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 SLC25A52Q3SY17 297 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 CCDC14Q49A88 953 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 Q6ZNB5 142 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 H2AFVQ71UI9 128 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 ASIC4Q96FT7 647 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 FCRL2Q96LA5 508 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 TBCBQ99426 244 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 TRIM7Q9C029 511 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 E2F8A0AVK6 867 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 M0QYT0 321 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 ARNTLO00327 626 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 SCAMP3O14828 347 aaKnown RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 ENDOD1O94919 500 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 HMBSP08397 361 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 TMEM253P0C7T8 217 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 PDGFRAP16234 1089 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 KCNA4P22459 653 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 PTPN9P43378 593 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 CCZ1BP86790 482 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RING1Q06587 406 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 ZNF252P-AS1Q0IIN9 211 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 C15orf59Q2T9L4 293 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 KIAA1958Q8N8K9 716 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 DEPDC1BQ8WUY9 529 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 CENPIQ92674 756 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-202ENST00000461433 ZFYVE19Q96K21 471 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 SERPINB11Q96P15 392 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 FAM83CQ9BQN1 747 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RRN3Q9NYV6 651 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 TLR6Q9Y2C9 796 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 PCDHA13Q9Y5I0 950 aa11.75□□□□□ -0.53
SSBP1-202ENST00000461433 RCCD1A6NED2 376 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 NARSO43776 548 aaKnown RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 GPD1P21695 349 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 MAGEA1P43355 309 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 SULT1E1P49888 294 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms