RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 CCDC157Q569K6 752 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 ZNF605Q86T29 641 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 WDR49Q8IV35 697 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 BHMTQ93088 406 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 SIPA1Q96FS4 1042 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 NUP58Q9BVL2 599 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 THAP10Q9P2Z0 257 aaPredicted RBP12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 SLC27A6Q9Y2P4 619 aa12.28□□□□□ -0.44
PCYT1A-213ENST00000460827 COL5A1P20908 1838 aaPredicted RBP12.27□□□□□ -0.44
PCYT1A-213ENST00000460827 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
PCYT1A-213ENST00000460827 LRRK2Q5S007 2527 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 FRMD3A2A2Y4 597 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 ZNF233A6NK53 670 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 A8MXQ7 604 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 KCNK3O14649 394 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 KIAA0391O15091 583 aaKnown RBP12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 PCDHGA12O60330 932 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 ZNF132P52740 706 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 COPAP53621 1224 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 ALCAMQ13740 583 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 SURF1Q15526 300 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 GEN1Q17RS7 908 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 LARP1BQ659C4 914 aaKnown RBP12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 Q6ZNB5 142 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 TMPRSS12Q86WS5 348 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 ZMIZ2Q8NF64 920 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 NXPE2Q96DL1 559 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 NACA2Q9H009 215 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 DMAP1Q9NPF5 467 aaPredicted RBP12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 COMMD8Q9NX08 183 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 OSER1Q9NX31 292 aa12.27□□□□□ -0.45
PCYT1A-213ENST00000460827 H0Y8X5 98 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 NPC1O15118 1278 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 HOXD13P35453 343 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 MFAP3P55082 362 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 CLDN6P56747 220 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 LAYNQ6UX15 382 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 FAM124AQ86V42 546 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 CACUL1Q86Y37 369 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 IGSF8Q969P0 613 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 FCRL3Q96P31 734 aaPredicted RBP12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 SMOQ99835 787 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 C6orf106Q9H6K1 298 aaPredicted RBP12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 CYLDQ9NQC7 956 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.451e-15■■■■■ 136.6
PCYT1A-213ENST00000460827 ANKRD6Q9Y2G4 727 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 KIF3AQ9Y496 699 aa12.26□□□□□ -0.45
PCYT1A-213ENST00000460827 PAPSS1O43252 624 aaPredicted RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 BEST1O76090 585 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 STAU1O95793 577 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 BMP15O95972 392 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 PENKP01210 267 aaPredicted RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 DLATP10515 647 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 IDEP14735 1019 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 PRKCHP24723 683 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 ACSL1P33121 698 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 GRIA4P48058 902 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 CCT8P50990 548 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 EMP3P54852 163 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 MYL6P60660 151 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 TNNC1P63316 161 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SEMG2Q02383 582 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 ZNF234Q14588 700 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SF3A1Q15459 793 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SNX19Q92543 992 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 ZNF516Q92618 1163 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 PIWIL1Q96J94 861 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 TM9SF3Q9HD45 589 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 TLR8Q9NR97 1041 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 HSPBP1Q9NZL4 362 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 LSM7Q9UK45 103 aaKnown RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 ATP8B3O60423 1300 aa12.25□□□□□ -0.45
PCYT1A-213ENST00000460827 J3QKU1 62 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 MDM4O15151 490 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 SYNCRIPO60506 623 aaKnown RBP12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 PLXNA2O75051 1894 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 AP1G2O75843 785 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 KLKB1P03952 638 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 ATP5C1P36542 298 aaKnown RBP12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 CTSKP43235 329 aa12.24□□□□□ -0.45
PCYT1A-213ENST00000460827 CDH8P55286 799 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms