RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ACSF2Q96CM8 615 aaPredicted RBP14.65□□□□□ -0.06
ERCC3-205ENST00000460485 SLC2A13Q96QE2 648 aa14.65□□□□□ -0.06
ERCC3-205ENST00000460485 POPDC2Q9HBU9 364 aa14.65□□□□□ -0.06
ERCC3-205ENST00000460485 TMEM39AQ9NV64 488 aa14.65□□□□□ -0.06
ERCC3-205ENST00000460485 CXXC1Q9P0U4 656 aaPredicted RBP14.65□□□□□ -0.06
ERCC3-205ENST00000460485 NOD1Q9Y239 953 aa14.65□□□□□ -0.06
ERCC3-205ENST00000460485 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 C5orf60A6NFR6 353 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 H3BRJ5 948 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 STK10O94804 968 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PGK1P00558 417 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 F9P00740 461 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PDGFRBP09619 1106 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 BMP1P13497 986 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 TYMPP19971 482 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 CYP2F1P24903 491 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 ATP11AP98196 1134 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 SCAPQ12770 1279 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 TUSC3Q13454 348 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 RASIP1Q5U651 963 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 ARHGEF18Q6ZSZ5 1173 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 CLEC20AQ6ZU45 233 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 YTHDF3Q7Z739 585 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 FAM35AQ86V20 835 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 OSTM1Q86WC4 334 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PLD5Q8N7P1 536 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 MYCBPAPQ8TBZ2 947 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 CPT1BQ92523 772 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PIWIL1Q96J94 861 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 XPO6Q96QU8 1125 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 GAD1Q99259 594 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 ACBD6Q9BR61 282 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 MED10Q9BTT4 135 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 BRD8Q9H0E9 1235 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 CXCL16Q9H2A7 254 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 NRDE2Q9H7Z3 1164 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 SSU72Q9NP77 194 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 INTS9Q9NV88 658 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 DDX43Q9NXZ2 648 aaKnown RBP14.64□□□□□ -0.07
ERCC3-205ENST00000460485 PADI3Q9ULW8 664 aa14.64□□□□□ -0.07
ERCC3-205ENST00000460485 NLRC5Q86WI3 1866 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 H7C0C1 242 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 M0QZQ0 153 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 TULP2O00295 520 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 EOMESO95936 686 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 TIMP1P01033 207 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 CD48P09326 243 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 LCP1P13796 627 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 LMO2P25791 158 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 L1CAMP32004 1257 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 HTR7P34969 479 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 RPL22P35268 128 aaKnown RBP14.63□□□□□ -0.07
ERCC3-205ENST00000460485 THPOP40225 353 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 ATP5OP48047 213 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 SULT1E1P49888 294 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 IRX5P78411 483 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-205ENST00000460485 CDK16Q00536 496 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 ADIGQ0VDE8 80 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 FAAP100Q0VG06 881 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 KCNA10Q16322 511 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 UPP1Q16831 310 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 AAK1Q2M2I8 961 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 CCDC38Q502W7 563 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 SLC45A4Q5BKX6 768 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 RAB41Q5JT25 222 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 WSCD1Q658N2 575 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 AGMOQ6ZNB7 445 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 MCUQ8NE86 351 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 GSTCDQ8NEC7 633 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 PYROXD1Q8WU10 500 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 SGSM3Q96HU1 749 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 QKIQ96PU8 341 aaKnown RBP eCLIP14.63□□□□□ -0.07
ERCC3-205ENST00000460485 NPY6RQ99463 290 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 FAM118BQ9BPY3 351 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 SELENOSQ9BQE4 189 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 FTHL17Q9BXU8 183 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 PBX4Q9BYU1 374 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 PRDM12Q9H4Q4 367 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 GOLGA2P5Q9HBQ8 144 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 KRT82Q9NSB4 513 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 EURLQ9NYK6 297 aa14.63□□□□□ -0.07
ERCC3-205ENST00000460485 SMG5Q9UPR3 1016 aaKnown RBP14.63□□□□□ -0.07
ERCC3-205ENST00000460485 TCF20Q9UGU0 1960 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 DCDC2CA8MYV0 355 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 TMEM189-UBE2V1I3L0A0 370 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 NCAM2O15394 837 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 GCATO75600 419 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 GRAP2O75791 330 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CTSHP09668 335 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CHN1P15882 459 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 TPSB2P20231 275 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 TKTP29401 623 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CYP2C18P33260 490 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 HCAR3P49019 387 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 SARNPP82979 210 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms