RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LINC00473A8K010 186 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A5PA8MXJ8 464 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 H0YIZ8 118 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FCHO1O14526 889 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM155BO75949 473 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 ACTL6BO94805 426 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FGAP02671 866 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 PRKCBP05771 671 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A15PP0C7V4 464 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FAM90A14PP0C7W9 464 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 GYS1P13807 737 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 TPTEP56180 551 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 POLE2P56282 527 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 EIF4A1P60842 406 aaKnown RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 MRPS35P82673 323 aaKnown RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 E2F1Q01094 437 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 KCNJ12Q14500 433 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 ZNF169Q14929 603 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 ST3GAL2Q16842 350 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 TMEM196Q5HYL7 178 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 WDR53Q7Z5U6 358 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 SLC44A2Q8IWA5 706 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 NRSN1Q8IZ57 195 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 SCAMP5Q8TAC9 235 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 SMG7Q92540 1137 aaKnown RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 LTV1Q96GA3 475 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 LENG8Q96PV6 779 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 THAP7Q9BT49 309 aaPredicted RBP3.94□□□□□ -1.78
RFC4-211ENST00000460408 DUSP26Q9BV47 211 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 FSD1LQ9BXM9 530 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 ARHGEF3Q9NR81 526 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 SEMA4GQ9NTN9 838 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 SAGE1Q9NXZ1 904 aa3.94□□□□□ -1.78
RFC4-211ENST00000460408 PNMA6EA0A0J9YXQ4 647 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 CCDC151A5D8V7 595 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 DNAJC9-AS1A6NH13 148 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 M0QZQ0 153 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PSMD9O00233 223 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 MGST3O14880 152 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 CTIFO43310 598 aaKnown RBP3.93□□□□□ -1.78
RFC4-211ENST00000460408 RPP40O75818 363 aaKnown RBP3.93□□□□□ -1.78
RFC4-211ENST00000460408 C1QL1O75973 258 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 TMEM225BP0DP42 221 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 CST5P28325 142 aaPredicted RBP3.93□□□□□ -1.78
RFC4-211ENST00000460408 ARL4CP56559 192 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 AP2B1P63010 937 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 SIM1P81133 766 aaPredicted RBP3.93□□□□□ -1.78
RFC4-211ENST00000460408 PSG6Q00889 435 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 DEUP1Q05D60 604 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PPFIA1Q13136 1202 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PLAC9Q5JTB6 97 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 ANKRD16Q6P6B7 361 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 KLHL17Q6TDP4 642 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PTCHD4Q6ZW05 846 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PARS2Q7L3T8 475 aaKnown RBP3.93□□□□□ -1.78
RFC4-211ENST00000460408 CPXCR1Q8N123 301 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 LRRC71Q8N4P6 559 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 C9orf106Q8NAJ2 232 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PPM1EQ8WY54 764 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 SCLT1Q96NL6 688 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 PAGR1Q9BTK6 254 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 KCNK9Q9NPC2 374 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 ITM2CQ9NQX7 267 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 RNF7Q9UBF6 113 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 ASAP1Q9ULH1 1129 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 DAPP1Q9UN19 280 aa3.93□□□□□ -1.78
RFC4-211ENST00000460408 LOC105369274A0A096LPK9 316 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 LOC102723532A0A0G2JNH3 316 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 CCDC189A1A4V9 331 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 AP4M1O00189 453 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 ZNF213O14771 459 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 TTLL1O95922 423 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 MBPP02686 304 aaPredicted RBP3.92□□□□□ -1.78
RFC4-211ENST00000460408 DLDP09622 509 aaKnown RBP3.92□□□□□ -1.78
RFC4-211ENST00000460408 HSD3B1P14060 373 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 DRD1P21728 446 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 DRD4P21917 467 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 ADRA1DP25100 572 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 CYP2C18P33260 490 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 CCT5P48643 541 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 DIO1P49895 249 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 PDE1AP54750 535 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
RFC4-211ENST00000460408 DNASE1L3Q13609 305 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 CSHL1Q14406 222 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 TIGD6Q17RP2 521 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 BTBD16Q32M84 506 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 TTC22Q5TAA0 569 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 RINT1Q6NUQ1 792 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 RFX8Q6ZV50 586 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 C1QL2Q7Z5L3 287 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 TRABD2AQ86V40 505 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 MOGAT3Q86VF5 341 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 OR4N4Q8N0Y3 316 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 SIRT6Q8N6T7 355 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 PNPLA1Q8N8W4 532 aa3.92□□□□□ -1.78
RFC4-211ENST00000460408 SPPL3Q8TCT6 385 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms