RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TOGARAM2Q6ZUX3 1019 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 RSRC2Q7L4I2 434 aaKnown RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 CHPFQ8IZ52 775 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 DHTKD1Q96HY7 919 aaPredicted RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 CEP63Q96MT8 703 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 GABRG3Q99928 467 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 HESX1Q9UBX0 185 aa23.89■■□□□ 1.41
PTPN4-207ENST00000460162 TPRP12270 2363 aaKnown RBP23.89■■□□□ 1.41
PTPN4-207ENST00000460162 A0A1W2PQF6 199 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 PRRT4C9JH25 899 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 MAP3K13O43283 966 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 ZBED1O96006 694 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 PENKP01210 267 aaPredicted RBP23.88■■□□□ 1.41
PTPN4-207ENST00000460162 KLKB1P03952 638 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 KCNA4P22459 653 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 CORO1AP31146 461 aaKnown RBP23.88■■□□□ 1.41
PTPN4-207ENST00000460162 PM20D1Q6GTS8 502 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 UBR7Q8N806 425 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 BHMTQ93088 406 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 LSM14BQ9BX40 385 aaKnown RBP23.88■■□□□ 1.41
PTPN4-207ENST00000460162 MARCH2Q9P0N8 246 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 CALCOCO1Q9P1Z2 691 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 MBD1Q9UIS9 605 aaPredicted RBP23.88■■□□□ 1.41
PTPN4-207ENST00000460162 FBXO10Q9UK96 956 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 CEP192Q8TEP8 1941 aa23.88■■□□□ 1.41
PTPN4-207ENST00000460162 PMM2O15305 246 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 CISD3P0C7P0 127 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 CD19P15391 556 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 FMO5P49326 533 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 PDE4CQ08493 712 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 FYB2Q5VWT5 728 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 FOXR2Q6PJQ5 311 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 PLD4Q96BZ4 506 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 ULBP1Q9BZM6 244 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 CD248Q9HCU0 757 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 OLA1Q9NTK5 396 aaKnown RBP23.87■■□□□ 1.41
PTPN4-207ENST00000460162 EVLQ9UI08 416 aaPredicted RBP23.87■■□□□ 1.41
PTPN4-207ENST00000460162 SLC27A6Q9Y2P4 619 aa23.87■■□□□ 1.41
PTPN4-207ENST00000460162 GFRA2O00451 464 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 ZBTB24O43167 697 aaPredicted RBP23.86■■□□□ 1.41
PTPN4-207ENST00000460162 HMBSP08397 361 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 SETSIPP0DME0 302 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 VDRP11473 427 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 WASP42768 502 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 BHLHA9Q7RTU4 235 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 CPXM2Q8N436 756 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 FRMD1Q8N878 549 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 IPO4Q8TEX9 1081 aaKnown RBP23.86■■□□□ 1.41
PTPN4-207ENST00000460162 PIGKQ92643 395 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 CNTNAP3BQ96NU0 1288 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 ACOX2Q99424 681 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 CNTNAP3Q9BZ76 1288 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 LRRC4Q9HBW1 653 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 PLK2Q9NYY3 685 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 MAN1B1Q9UKM7 699 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 AGO1Q9UL18 857 aaKnown RBP23.86■■□□□ 1.41
PTPN4-207ENST00000460162 KIAA1257Q9ULG3 409 aa23.86■■□□□ 1.41
PTPN4-207ENST00000460162 EPG5Q9HCE0 2579 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 PATE3B3GLJ2 98 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 TULP2O00295 520 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 O00370 1275 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 AP5Z1O43299 807 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 ZNF217O75362 1048 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 HOXD12P35452 270 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 PTGER3P43115 390 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 ADIGQ0VDE8 80 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 LRMPQ12912 555 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 CCDC40Q4G0X9 1142 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 LYSMD4Q5XG99 296 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 SLC36A4Q6YBV0 504 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 SYT12Q8IV01 421 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 TMEFF1Q8IYR6 380 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 P2RY11Q96G91 374 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 NT5C1BQ96P26 610 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 IPO9Q96P70 1041 aaKnown RBP23.85■■□□□ 1.41
PTPN4-207ENST00000460162 TMEM9BQ9NQ34 198 aa23.85■■□□□ 1.41
PTPN4-207ENST00000460162 SLC12A8A0AV02 714 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 C4orf47A7E2U8 309 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 NPC1O15118 1278 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 CYBBP04839 570 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 PAEPP09466 180 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 CD44P16070 742 aaKnown RBP23.84■■□□□ 1.41
PTPN4-207ENST00000460162 NDUFV2P19404 249 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 MFAP3P55082 362 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 DAB2IPQ5VWQ8 1189 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 PEAR1Q5VY43 1037 aaPredicted RBP23.84■■□□□ 1.41
PTPN4-207ENST00000460162 TTI2Q6NXR4 508 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 ARMCX6Q7L4S7 300 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 DENND1CQ8IV53 801 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 FAM217AQ8IXS0 508 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 SIX6OS1Q8N1H7 587 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 SCML4Q8N228 414 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 KCTD13Q8WZ19 329 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 CACNA2D2Q9NY47 1150 aa23.84■■□□□ 1.41
PTPN4-207ENST00000460162 CHD8Q9HCK8 2581 aa23.83■■□□□ 1.41
PTPN4-207ENST00000460162 BICDL2A1A5D9 508 aa23.83■■□□□ 1.41
PTPN4-207ENST00000460162 P4HA2O15460 535 aa23.83■■□□□ 1.41
PTPN4-207ENST00000460162 RPL6Q02878 288 aaKnown RBP23.83■■□□□ 1.41
PTPN4-207ENST00000460162 CETN1Q12798 172 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms