RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MTDHQ86UE4 582 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 LCA5Q86VQ0 697 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 LONP2Q86WA8 852 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 WDR75Q8IWA0 830 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TMEM192Q8IY95 271 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ZNF276Q8N554 614 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 PQLC3Q8N755 202 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ANKLE1Q8NAG6 615 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 FAM13CQ8NE31 585 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 PCDH19Q8TAB3 1148 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 CCDC110Q8TBZ0 833 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 DEPDC1BQ8WUY9 529 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SPOCK2Q92563 424 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 OPTNQ96CV9 577 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SLC7A6OSQ96CW6 309 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 MRRFQ96E11 262 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 CFAP36Q96G28 342 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 OXNAD1Q96HP4 312 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 PPP1R2P1Q96PQ5 205 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 FAM111AQ96PZ2 611 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 C11orf84Q9BUA3 381 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TRIM62Q9BVG3 475 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TRIM6Q9C030 488 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SNX25Q9H3E2 840 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 RRN3Q9NYV6 651 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TXNDC16Q9P2K2 825 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 HEY2Q9UBP5 337 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TJP2Q9UDY2 1190 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 HAO1Q9UJM8 370 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ADAM28Q9UKQ2 775 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 HEY1Q9Y5J3 304 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SNX9Q9Y5X1 595 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.95
HDAC3-202ENST00000459727 NRCAMQ92823 1304 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 A0A0G2JND7 137 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TCRBV7S3A2A0A539 114 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 SDR42E2A6NKP2 422 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 FOXO6A8MYZ6 492 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 F8W8V4 182 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PAPSS1O43252 624 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MAGEC1O60732 1142 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 BANF1O75531 89 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CSDE1O75534 798 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CIB2O75838 187 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 ALDH1A2O94788 518 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 RPLP2P05387 115 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 DLDP09622 509 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CYP2C9P11712 490 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CCDC130P13994 396 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 KCNE1P15382 129 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 ACADSP16219 412 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PGAM1P18669 254 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PAX3P23760 479 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 IL4RP24394 825 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 L1CAMP32004 1257 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MATKP42679 507 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 GLUD2P49448 558 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TAF6P49848 677 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CDK7P50613 346 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 HDAC4P56524 1084 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MRPS35P82673 323 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 WASHC5Q12768 1159 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 SF3A3Q12874 501 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MMRN1Q13201 1228 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 ZBTB6Q15916 424 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CCDC6Q16204 474 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 C15orf59Q2T9L4 293 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 SLC25A52Q3SY17 297 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 DUSP28Q4G0W2 176 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TAPT1Q6NXT6 567 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PMF1Q6P1K2 205 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 LRRC8BQ6P9F7 803 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 NPNTQ6UXI9 565 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 UNC5AQ6ZN44 842 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 ACOT1Q86TX2 421 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CAND1Q86VP6 1230 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TTC30AQ86WT1 665 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 NUDCD3Q8IVD9 361 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PPFIBP2Q8ND30 876 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 APPL2Q8NEU8 664 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 OR6B3Q8NGW1 331 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PPP1R14CQ8TAE6 165 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PPP4R1Q8TF05 950 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 STON2Q8WXE9 905 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 PTCD3Q96EY7 689 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CDCA5Q96FF9 252 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CPB2Q96IY4 423 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms