RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CD93Q9NPY3 652 aa15.15■□□□□ 0.02
UPF3AP2-201ENST00000457924 CACNA2D2Q9NY47 1150 aa15.15■□□□□ 0.02
UPF3AP2-201ENST00000457924 MARK1Q9P0L2 795 aa15.15■□□□□ 0.02
UPF3AP2-201ENST00000457924 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
UPF3AP2-201ENST00000457924 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
UPF3AP2-201ENST00000457924 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 GREM1O60565 184 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 TBX18O95935 607 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 BIRC3Q13489 604 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 SLC39A14Q15043 492 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 ZNF699Q32M78 642 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 FAM26FQ5R3K3 315 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 PDZD3Q86UT5 571 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 NELFCDQ8IXH7 590 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 FUKQ8N0W3 1084 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 SETD7Q8WTS6 366 aaKnown RBP15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 TRIM9Q9C026 710 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 VRTNQ9H8Y1 702 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 UBE4BO95155 1302 aa15.14■□□□□ 0.01
UPF3AP2-201ENST00000457924 ANKRD11Q6UB99 2663 aaPredicted RBP15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 CISD3P0C7P0 127 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 NCAM1P13591 858 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 PGFP49763 221 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 AP3M2P53677 418 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 MAP3K7CLP57077 242 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 STARD3Q14849 445 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 COL28A1Q2UY09 1125 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 GLRX5Q86SX6 157 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 ACOT1Q86TX2 421 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 ZMIZ2Q8NF64 920 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 TOE1Q96GM8 510 aaKnown RBP15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 SMOQ99835 787 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 MIR1-1HGQ9H1L0 117 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 CUEDC2Q9H467 287 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 PRDM16Q9HAZ2 1276 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 CSNK1G1Q9HCP0 422 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 PCOLCE2Q9UKZ9 415 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 STON1Q9Y6Q2 735 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 PTPRBP23467 1997 aa15.13■□□□□ 0.01
UPF3AP2-201ENST00000457924 WASH3PC4AMC7 463 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 EXOC3O60645 756 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 BEST1O76090 585 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 CER1O95813 267 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 P4HA1P13674 534 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 CCDC130P13994 396 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 TRIM21P19474 475 aaKnown RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 SOWAHCQ53LP3 525 aaPredicted RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 ZCCHC9Q8N567 271 aaKnown RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 CADM4Q8NFZ8 388 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 SLC2A14Q8TDB8 520 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 DNASE2BQ8WZ79 361 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 BHMTQ93088 406 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 GPR174Q9BXC1 333 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 ITM2CQ9NQX7 267 aa15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 WSB2Q9NYS7 404 aaPredicted RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 KIAA1522Q9P206 1035 aaPredicted RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 DSPP15924 2871 aaKnown RBP15.12■□□□□ 0.01
UPF3AP2-201ENST00000457924 NPC1O15118 1278 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 CBFA2T3O75081 653 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 OXTRP30559 389 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 CASP4P49662 377 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 ZNF132P52740 706 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 NCOA4Q13772 614 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 FUT11Q495W5 492 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 CNNM4Q6P4Q7 775 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 IL27RAQ6UWB1 636 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 SLCO6A1Q86UG4 719 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 C12orf56Q8IXR9 622 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 MDM1Q8TC05 714 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 DHX58Q96C10 678 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 SDCBP2Q9H190 292 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 GAREM1Q9H706 876 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 PLK2Q9NYY3 685 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 USP36Q9P275 1121 aaKnown RBP15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 DNMT3LQ9UJW3 386 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 SCML2Q9UQR0 700 aa15.11■□□□□ 0.01
UPF3AP2-201ENST00000457924 BCAT2O15382 392 aaPredicted RBP15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 CYP26A1O43174 497 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 SYNCRIPO60506 623 aaKnown RBP15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 FAM200BP0CF97 657 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 ZNF883P0CG24 379 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 RARGP13631 454 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 SYT1P21579 422 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 ADORA2BP29275 332 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 MATKP42679 507 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 NDST1P52848 882 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 ORC1Q13415 861 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 CUL4AQ13619 759 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 STK38Q15208 465 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 E2F5Q15329 346 aa15.1■□□□□ 0.01
UPF3AP2-201ENST00000457924 DCAF12L1Q5VU92 463 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms