RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 GNA14O95837 355 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 HMBSP08397 361 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 SDHBP21912 280 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 CORO1AP31146 461 aaKnown RBP12.97□□□□□ -0.33
VEGFA-210ENST00000457104 ZNF132P52740 706 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 GCNT1Q02742 428 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
VEGFA-210ENST00000457104 CNGA2Q16280 664 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 EOGTQ5NDL2 527 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 GRAMD4Q6IC98 578 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 PMF1Q6P1K2 205 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 SCML4Q8N228 414 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 ZNF513Q8N8E2 541 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-210ENST00000457104 BHMTQ93088 406 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 LRRC4Q9HBW1 653 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 PLK2Q9NYY3 685 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 AGO1Q9UL18 857 aaKnown RBP12.97□□□□□ -0.33
VEGFA-210ENST00000457104 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
VEGFA-210ENST00000457104 CNTN6Q9UQ52 1028 aa12.97□□□□□ -0.33
VEGFA-210ENST00000457104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.331e-11■□□□□ 9.4
VEGFA-210ENST00000457104 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 MED19A0JLT2 244 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 PENKP01210 267 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 AFPP02771 609 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 BCKDHBP21953 392 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 BRD2P25440 801 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 CETN1Q12798 172 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 FYB2Q5VWT5 728 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 DENND1CQ8IV53 801 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 RBBP8NLQ8NC74 664 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 XPO6Q96QU8 1125 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 ACOX2Q99424 681 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 INTS2Q9H0H0 1204 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 RWDD2AQ9UIY3 292 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 CDV3Q9UKY7 258 aaKnown RBP12.96□□□□□ -0.33
VEGFA-210ENST00000457104 ZNF510Q9Y2H8 683 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 PCDHGA5Q9Y5G8 931 aa12.96□□□□□ -0.33
VEGFA-210ENST00000457104 GON4LQ3T8J9 2241 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 A0A1W2PQF6 199 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 LCP1P13796 627 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 NTSR1P30989 418 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 CHKAP35790 457 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 MPLP40238 635 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 P2RY2P41231 377 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 DGKGP49619 791 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 RGS7P49802 495 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 DAOAP59103 153 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-210ENST00000457104 ELF2Q15723 593 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 PMS2CLQ68D20 193 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 NUDT18Q6ZVK8 323 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 FAM217AQ8IXS0 508 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 CPXM2Q8N436 756 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 RLN3Q8WXF3 142 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 EDEM1Q92611 657 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 IPO9Q96P70 1041 aaKnown RBP12.95□□□□□ -0.34
VEGFA-210ENST00000457104 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 SMOC1Q9H4F8 434 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-210ENST00000457104 CNGB3Q9NQW8 809 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
VEGFA-210ENST00000457104 SFMBT1Q9UHJ3 866 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 ADAMTS9Q9P2N4 1935 aa12.95□□□□□ -0.34
VEGFA-210ENST00000457104 SPTBN2O15020 2390 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 TCRBV21S2A2A0A5A6 115 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
VEGFA-210ENST00000457104 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 M0QYV0 167 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 GFRA2O00451 464 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 PIK3R2O00459 728 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 SLC30A4O14863 429 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-210ENST00000457104 ALDH1A2O94788 518 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 FGFR1OPO95684 399 aaKnown RBP12.94□□□□□ -0.34
VEGFA-210ENST00000457104 GABRG2P18507 467 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 GBP1P32455 592 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 WASP42768 502 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 RPL34P49207 117 aaKnown RBP12.94□□□□□ -0.34
VEGFA-210ENST00000457104 STILQ15468 1287 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 MAP7D1Q3KQU3 841 aa12.94□□□□□ -0.34
VEGFA-210ENST00000457104 MSANTD2Q6P1R3 559 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms