RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953		A8MXQ7	604 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	PLK4	O00444	970 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	RRP8	O43159	456 aa	Known RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	TNNC1	P63316	161 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	GRIN1	Q05586	938 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	E2F5	Q15329	346 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	TEAD4	Q15561	434 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	INAVA	Q3KP66	663 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	FAM173B	Q6P4H8	233 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	TRAPPC11	Q7Z392	1133 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	PRCC	Q92733	491 aa	Predicted RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	IGSF8	Q969P0	613 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	DNAJC19	Q96DA6	116 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	ZNF396	Q96N95	335 aa	Predicted RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	FCRL3	Q96P31	734 aa	Predicted RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	KLF16	Q9BXK1	252 aa	Predicted RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	STK17A	Q9UEE5	414 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	FBXO10	Q9UK96	956 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	ANKRD6	Q9Y2G4	727 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	SLC27A6	Q9Y2P4	619 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	SNX11	Q9Y5W9	270 aa		13.9	□□□□□ -0.18
SNHG17-208	ENST00000456953	MUC22	E2RYF6	1773 aa	Predicted RBP	13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953		J3QKU1	62 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	ACADM	P11310	421 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	ACO1	P21399	889 aa	Known RBP	13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	HNF1B	P35680	557 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	IL12RB1	P42701	662 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	GRIA4	P48058	902 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	CCT8	P50990	548 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	ORC1	Q13415	861 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	SF3A1	Q15459	793 aa	Known RBP	13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	WDR72	Q3MJ13	1102 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	C6orf118	Q5T5N4	469 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	FAM35A	Q86V20	835 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	CBWD2	Q8IUF1	395 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	SMARCD1	Q96GM5	515 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	OSGEP	Q9NPF4	335 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	TLR8	Q9NR97	1041 aa	Known RBP	13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	FTSJ1	Q9UET6	329 aa		13.89	□□□□□ -0.19
SNHG17-208	ENST00000456953	TEX51	A0A1B0GUA7	166 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	TBX18	O95935	607 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	CST3	P01034	146 aa	Predicted RBP	13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	CDK4	P11802	303 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	ATP5C1	P36542	298 aa	Known RBP	13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	CDH8	P55286	799 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	SEMG2	Q02383	582 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	UCMA	Q8WVF2	138 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	SNX19	Q92543	992 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	BAP1	Q92560	729 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	BHMT	Q93088	406 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	MED10	Q9BTT4	135 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	FBXO44	Q9H4M3	255 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	KIAA1586	Q9HCI6	787 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	CYLD	Q9NQC7	956 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	PCDHGA1	Q9Y5H4	931 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	SLCO1B1	Q9Y6L6	691 aa		13.88	□□□□□ -0.19
SNHG17-208	ENST00000456953	COL6A6	A6NMZ7	2263 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	CKAP5	Q14008	2032 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	FRMD3	A2A2Y4	597 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	PAPSS1	O43252	624 aa	Predicted RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	TLX3	O43711	291 aa	Predicted RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	DFNA5	O60443	496 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	AP1G2	O75843	785 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	STAU1	O95793	577 aa	Known RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	IDE	P14735	1019 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	JUP	P14923	745 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	PGF	P49763	221 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	COPA	P53621	1224 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	MFAP3	P55082	362 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	CEBPZ	Q03701	1054 aa	Known RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	ATL3	Q6DD88	541 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953		Q6ZNB5	142 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	PAQR9	Q6ZVX9	377 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	SV2B	Q7L1I2	683 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	GPR155	Q7Z3F1	870 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	SNIP1	Q8TAD8	396 aa	Known RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	EPSTI1	Q96J88	318 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	TNIP3	Q96KP6	325 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	FGFBP2	Q9BYJ0	223 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	TM9SF3	Q9HD45	589 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	KRT82	Q9NSB4	513 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	PLK2	Q9NYY3	685 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	TFIP11	Q9UBB9	837 aa	Known RBP	13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	CCDC39	Q9UFE4	941 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	CFAP45	Q9UL16	551 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	TMEM131	Q92545	1883 aa		13.87	□□□□□ -0.19
SNHG17-208	ENST00000456953	COL5A1	P20908	1838 aa	Predicted RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	MYH10	P35580	1976 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953		H0Y8X5	98 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	PENK	P01210	267 aa	Predicted RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	C1S	P09871	688 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	DLAT	P10515	647 aa	Known RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	TNNI1	P19237	187 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	KRT85	P78386	507 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	CFHR1	Q03591	330 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	DNM1	Q05193	864 aa	Known RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	RTP5	Q14D33	572 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms