RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TRIM6Q9C030 488 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 DHX35Q9H5Z1 703 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 AP4E1Q9UPM8 1137 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 GNEQ9Y223 722 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 IKBKGQ9Y6K9 419 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 SLC15A5A6NIM6 579 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 HGSO14964 777 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 DCTN3O75935 186 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 KRT16P08779 473 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 LCP1P13796 627 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 KCNE1P15382 129 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 ALDH3A1P30838 453 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 ACADSBP45954 432 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 NR2C2P49116 596 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 SLC8A3P57103 927 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 UBXN11Q5T124 520 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 SLC26A11Q86WA9 606 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 TMEM40Q8WWA1 233 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 HSFY1Q96LI6 401 aa19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 NOP53Q9NZM5 478 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 ZC3H7BQ9UGR2 993 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-209ENST00000456560 WDR91A4D1P6 747 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 LPXNO60711 386 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TOMM70O94826 608 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 METTL18O95568 372 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 GSTA2P09210 222 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 PRKCHP24723 683 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 FAM110CQ1W6H9 321 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF534Q76KX8 674 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF398Q8TD17 642 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 LRRC39Q96DD0 335 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ERP27Q96DN0 273 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF560Q96MR9 790 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 CSPG4P5Q96PW8 444 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 LRRC37BQ96QE4 947 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TSPAN18Q96SJ8 248 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 RNF39Q9H2S5 420 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 SNX25Q9H3E2 840 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TXLNGQ9NUQ3 528 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 SLC5A4Q9NY91 659 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 KLK14Q9P0G3 267 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF180Q9UJW8 692 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 APRTP07741 180 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TPSB2P20231 275 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 PNPLA4P41247 253 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 SOX4Q06945 474 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 SNX17Q15036 470 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TPSAB1Q15661 275 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 PRAMEF19Q5SWL8 479 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 TTC39BQ5VTQ0 682 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 CHSY1Q86X52 802 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 CCDC185Q8N715 623 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 QKIQ96PU8 341 aaKnown RBP eCLIP19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 MANSC1Q9H8J5 431 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 STK38LQ9Y2H1 464 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 USP3Q9Y6I4 520 aa19.04■□□□□ 0.64
SEMA3B-209ENST00000456560 CXorf49A8MYA2 514 aaPredicted RBP19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 C2CD2LO14523 706 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 ATP5HO75947 161 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 CCND1P24385 295 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 HUNKP57058 714 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 KCNT2Q6UVM3 1135 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 STRADAQ7RTN6 431 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 SLC2A14Q8TDB8 520 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 DNAJB3Q8WWF6 145 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 PTPRN2Q92932 1015 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 SIGLEC10Q96LC7 697 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 PTPN18Q99952 460 aa19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 PIN4Q9Y237 131 aaKnown RBP19.03■□□□□ 0.64
SEMA3B-209ENST00000456560 A8MUI8 341 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 PYGBP11216 843 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 PAX7P23759 505 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 TAF6P49848 677 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 MFSD10Q14728 455 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 PLEKHG4Q58EX7 1191 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 SPDYAQ5MJ70 313 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 LRRC6Q86X45 466 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 PPM1NQ8N819 430 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 MAB21L3Q8N8X9 362 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 APPL2Q8NEU8 664 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 PARK7Q99497 189 aaKnown RBP19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 SMYD2Q9NRG4 433 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 KANSL3Q9P2N6 904 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 CAPN15O75808 1086 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 EFHC1Q5JVL4 640 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 FYB2Q5VWT5 728 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 NCBP2-AS2Q69YL0 99 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 OSTM1Q86WC4 334 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 VPS52Q8N1B4 723 aa19.02■□□□□ 0.64
SEMA3B-209ENST00000456560 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.63
SEMA3B-209ENST00000456560 TRIM49D1C9J1S8 452 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 HAS3O00219 553 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 KIF3CO14782 793 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 XPOTO43592 962 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 DIAPH2O60879 1101 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 DGKIO75912 1065 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 APOEP02649 317 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 T-ENOLP0DO92 83 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms