RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PRMT8Q9NR22 394 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 PCDHGC3Q9UN70 934 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 ATG2BQ96BY7 2078 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 WDFY4Q6ZS81 3184 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 TBC1D3BA6NDS4 549 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 E5RJQ4 531 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 HOXC11O43248 304 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 GREM1O60565 184 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 KAT7O95251 611 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 TYRP14679 529 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 GRIA2P42262 883 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 POLR2FP61218 127 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 PDCLQ13371 301 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 NCAPHQ15003 741 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 SYCP1Q15431 976 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 C2orf27AQ580R0 203 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 Q6ZNB5 142 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 TMEM110Q86TL2 294 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 ACDQ96AP0 544 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 NLRC4Q9NPP4 1024 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 AGO1Q9UL18 857 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
PDLIM2-215ENST00000456545 SYCE3A1L190 88 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 LGALS16A8MUM7 142 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 PROB1E7EW31 1015 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 GFRA3O60609 400 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 TULP3O75386 442 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 KLKB1P03952 638 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 CYP11B1P15538 503 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 RPL34P49207 117 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 KLK7P49862 253 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 TPM4P67936 248 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 SKOR2Q2VWA4 1001 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 GAB4Q2WGN9 574 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 FILIP1LQ4L180 1135 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 GRAMD4Q6IC98 578 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 OR6B2Q6IFH4 312 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 DPY19L2P1Q6NXN4 242 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 C12orf40Q86WS4 652 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 UNC45BQ8IWX7 931 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 IPO4Q8TEX9 1081 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 NAA15Q9BXJ9 866 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 DNAJC17Q9NVM6 304 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 DAAM1Q9Y4D1 1078 aa18.87■□□□□ 0.61
PDLIM2-215ENST00000456545 LRRC10BA6NIK2 292 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 CHURC1-FNTBB4DL54 471 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 K7EQS6 105 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 ZNF18P17022 549 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 TNFRSF4P43489 277 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 TBX4P57082 545 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 YWHAZP63104 245 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 TRIP4Q15650 581 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 MSANTD2Q6P1R3 559 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 PKN3Q6P5Z2 889 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 TMEM35BQ8NCS4 154 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 C1orf131Q8NDD1 294 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 DDI1Q8WTU0 396 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 POPDC2Q9HBU9 364 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 PLK2Q9NYY3 685 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 CYTH4Q9UIA0 394 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 NAALADL1Q9UQQ1 740 aa18.86■□□□□ 0.61
PDLIM2-215ENST00000456545 F8VZ95 297 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 PAPSS1O43252 624 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 GFPT2O94808 682 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 TIE1P35590 1138 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 STAT1P42224 750 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 SLC11A2P49281 568 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 FNTBP49356 437 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 MRPS21P82921 87 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 EFHC1Q5JVL4 640 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 CCDC33Q8N5R6 958 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 MSANTD4Q8NCY6 345 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 EZH1Q92800 747 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 SERPINB11Q96P15 392 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 GANQ9H2C0 597 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 MARK1Q9P0L2 795 aa18.85■□□□□ 0.61
PDLIM2-215ENST00000456545 TSPAN3O60637 253 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 PAPSS2O95340 614 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 LMNAP02545 664 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 ATP1A3P13637 1013 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 SOX5P35711 763 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 DGKGP49619 791 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 DMC1Q14565 340 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 MPPE1Q53F39 396 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 C10orf76Q5T2E6 689 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 NUGGCQ68CJ6 796 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 SYT13Q7L8C5 426 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 CACNA2D4Q7Z3S7 1137 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 ETFBKMTQ8IXQ9 262 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 CPXM2Q8N436 756 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 ZBTB44Q8NCP5 570 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 USP33Q8TEY7 942 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 CPXM1Q96SM3 734 aa18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 DDX50Q9BQ39 737 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-215ENST00000456545 C2orf42Q9NWW7 574 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms