RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 FBXO21O94952 628 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 EPN2O95208 641 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 CYBBP04839 570 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
MSH6-207ENST00000456246 ZNF445P59923 1031 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 E2F5Q15329 346 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
MSH6-207ENST00000456246 BSPRYQ5W0U4 402 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 ANO7Q6IWH7 933 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 CLEC17AQ6ZS10 378 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 BHLHA9Q7RTU4 235 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 CPXM2Q8N436 756 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 ZNF513Q8N8E2 541 aaPredicted RBP18.7■□□□□ 0.58
MSH6-207ENST00000456246 GOLGA1Q92805 767 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 PARD6AQ9NPB6 346 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 SEMA4GQ9NTN9 838 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 CDV3Q9UKY7 258 aaKnown RBP18.7■□□□□ 0.58
MSH6-207ENST00000456246 RALGAPA1Q6GYQ0 2036 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 MYO18AQ92614 2054 aaKnown RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 RNF225M0QZC1 329 aaPredicted RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 SGK1O00141 431 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 SART1O43290 800 aaKnown RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 MED7O43513 233 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 LATS1O95835 1130 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 PENKP01210 267 aaPredicted RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 KLKB1P03952 638 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 KRT5P13647 590 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 BRD2P25440 801 aaKnown RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 HARS2P49590 506 aaKnown RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 DGKGP49619 791 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 MFAP3P55082 362 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 DAOAP59103 153 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 TRIP4Q15650 581 aaPredicted RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 PLK5Q496M5 336 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 SFTPA1Q8IWL2 248 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 MDGA1Q8NFP4 955 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 KREMEN1Q96MU8 473 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 NUP62CLQ9H1M0 184 aa18.69■□□□□ 0.58
MSH6-207ENST00000456246 UBE2TQ9NPD8 197 aaPredicted RBP18.69■□□□□ 0.58
MSH6-207ENST00000456246 SDK1Q7Z5N4 2213 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 HMBSP08397 361 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 LCP1P13796 627 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 ERCC5P28715 1186 aaPredicted RBP18.68■□□□□ 0.58
MSH6-207ENST00000456246 NTSR1P30989 418 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
MSH6-207ENST00000456246 RSPO4Q2I0M5 234 aaPredicted RBP18.68■□□□□ 0.58
MSH6-207ENST00000456246 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 TRIM65Q6PJ69 517 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 TMEM92Q6UXU6 159 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 GBP6Q6ZN66 633 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 PRR23CQ6ZRP0 262 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 CREBRFQ8IUR6 639 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 FMNL3Q8IVF7 1028 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 SPACA7Q96KW9 195 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 TRIM62Q9BVG3 475 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 THAP9Q9H5L6 903 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 FBXO10Q9UK96 956 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 AGO1Q9UL18 857 aaKnown RBP18.68■□□□□ 0.58
MSH6-207ENST00000456246 SLC27A6Q9Y2P4 619 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 DCHS1Q96JQ0 3298 aa18.68■□□□□ 0.58
MSH6-207ENST00000456246 YJEFN3A6XGL0 299 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 E7ENQ6 273 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 NPC1O15118 1278 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 ZBTB24O43167 697 aaPredicted RBP18.67■□□□□ 0.58
MSH6-207ENST00000456246 ACADSBP45954 432 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 MTIF2P46199 727 aaKnown RBP18.67■□□□□ 0.58
MSH6-207ENST00000456246 EXOC3L4Q17RC7 722 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 CT47A1Q5JQC4 288 aaPredicted RBP18.67■□□□□ 0.58
MSH6-207ENST00000456246 EMC10Q5UCC4 262 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 FYB2Q5VWT5 728 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 PMF1Q6P1K2 205 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 MSANTD2Q6P1R3 559 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 DGLUCYQ7Z3D6 616 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 DENND1CQ8IV53 801 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 FAM217AQ8IXS0 508 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 NETO1Q8TDF5 533 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 STK32AQ8WU08 396 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 ZSWIM1Q9BR11 485 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
MSH6-207ENST00000456246 APEX2Q9UBZ4 518 aa18.67■□□□□ 0.58
MSH6-207ENST00000456246 GFRA2O00451 464 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 ADAM23O75077 832 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 LTFP02788 710 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 HOXB2P14652 356 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 GBP1P32455 592 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 RGS7P49802 495 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 CHPFQ8IZ52 775 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 OLIG1Q8TAK6 271 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 NDRG1Q92597 394 aaKnown RBP18.66■□□□□ 0.58
MSH6-207ENST00000456246 EDEM1Q92611 657 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 MED15Q96RN5 788 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 RTKNQ9BST9 563 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 SLC2A11Q9BYW1 496 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 IRX2Q9BZI1 471 aaPredicted RBP18.66■□□□□ 0.58
MSH6-207ENST00000456246 TPSD1Q9BZJ3 242 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 DUSP15Q9H1R2 295 aaPredicted RBP18.66■□□□□ 0.58
MSH6-207ENST00000456246 ARRDC1-AS1Q9H2J1 176 aa18.66■□□□□ 0.58
MSH6-207ENST00000456246 STOML2Q9UJZ1 356 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms