RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 SMOC2Q9H3U7 446 aa11.21□□□□□ -0.62
SYPL1-202ENST00000455385 GOLPH3Q9H4A6 298 aa11.21□□□□□ -0.62
SYPL1-202ENST00000455385 TASP1Q9H6P5 420 aa11.21□□□□□ -0.62
SYPL1-202ENST00000455385 GKN1Q9NS71 199 aa11.21□□□□□ -0.62
SYPL1-202ENST00000455385 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.62
SYPL1-202ENST00000455385 M0QYT0 321 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 DPYSL4O14531 572 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MBTPS2O43462 519 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ENDOD1O94919 500 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MOCS3O95396 460 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 PSMA2P25787 234 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 SDC4P31431 198 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MTHFRP42898 656 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 SULT1E1P49888 294 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MESDQ14696 234 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 CDO1Q16878 200 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MYADMQ96S97 322 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 CNPY3Q9BT09 278 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 KLF16Q9BXK1 252 aaPredicted RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 MARCH2Q9P0N8 246 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 SYNJ2BP-COX16A0A087WUM0 186 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ZSCAN12O43309 604 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 KRT86O43790 486 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 TCF4P15884 667 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 HDAC4P56524 1084 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 TFF2Q03403 129 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 NME3Q13232 169 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ARHGAP15Q53QZ3 475 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 FAM172AQ8WUF8 416 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ANLNQ9NQW6 1124 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 OLA1Q9NTK5 396 aaKnown RBP11.2□□□□□ -0.62
SYPL1-202ENST00000455385 PIGVQ9NUD9 493 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 SMPD4Q9NXE4 827 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 COX16Q9P0S2 106 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 IP6K2Q9UHH9 426 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 ZKSCAN5Q9Y2L8 839 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 CAPN6Q9Y6Q1 641 aa11.2□□□□□ -0.62
SYPL1-202ENST00000455385 TRAV19A0A0A6YYK7 116 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 SLC12A8A0AV02 714 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 IRAK2O43187 625 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 PROSCO94903 275 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 DDX6P26196 483 aaKnown RBP eCLIP11.19□□□□□ -0.629e-7■■■□□ 16.7
SYPL1-202ENST00000455385 KCNQ1P51787 676 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 NAP1L1P55209 391 aaKnown RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 SLC7A9P82251 487 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 ARID3BQ8IVW6 561 aaPredicted RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 TXLNBQ8N3L3 684 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 NIPA2Q8N8Q9 360 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 LRRC57Q8N9N7 239 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 USP13Q92995 863 aaPredicted RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 PGAP3Q96FM1 320 aaPredicted RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 SLC39A13Q96H72 371 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 TSGA10Q9BZW7 698 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 NACA2Q9H009 215 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 KCND1Q9NSA2 647 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 DDIT4Q9NX09 232 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYPL1-202ENST00000455385 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 ALG6Q9Y672 507 aa11.19□□□□□ -0.62
SYPL1-202ENST00000455385 GRID2IPA4D2P6 1211 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 I6L893 689 aaPredicted RBP11.18□□□□□ -0.62
SYPL1-202ENST00000455385 LRCH4O75427 683 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 PRAMEF12O95522 483 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 CKMP06732 381 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 HMBSP08397 361 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 MBL2P11226 248 aaPredicted RBP11.18□□□□□ -0.62
SYPL1-202ENST00000455385 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 LEXMQ3ZCV2 418 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
SYPL1-202ENST00000455385 FAM78AQ5JUQ0 283 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 STRADAQ7RTN6 431 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 ZSCAN18Q8TBC5 510 aaPredicted RBP11.18□□□□□ -0.62
SYPL1-202ENST00000455385 NECTIN4Q96NY8 510 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 LRRC3BQ96PB8 259 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 MAGEB5Q9BZ81 275 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 FAM204AQ9H8W3 233 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 TMPRSS4Q9NRS4 437 aa11.18□□□□□ -0.62
SYPL1-202ENST00000455385 CDH7Q9ULB5 785 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms