RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 CHST12Q9NRB3 414 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NDE1Q9NXR1 346 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RNF103O00237 685 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MSCO60682 206 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RHOBTB1O94844 696 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PRKAR2AP13861 404 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 YWHAQP27348 245 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ARL2P36404 184 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TUBP50607 506 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RBBP7Q16576 425 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PARP9Q8IXQ6 854 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ANKRD52Q8NB46 1076 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PIP4K2CQ8TBX8 421 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SH3KBP1Q96B97 665 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TRIM15Q9C019 465 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MAF1Q9H063 256 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NINJ2Q9NZG7 142 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PHTF1Q9UMS5 762 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SERPINB4P48594 390 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 OXCT1P55809 520 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MGAT5Q09328 741 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SLC39A12Q504Y0 691 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LLGL2Q6P1M3 1020 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 FAM183BPQ6ZVS7 135 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KIF2BQ8N4N8 673 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HELQQ8TDG4 1101 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SERPINB11Q96P15 392 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TTYH3Q9C0H2 523 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DMAC2Q9NW81 257 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SMPD4Q9NXE4 827 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 VANGL2Q9ULK5 521 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 B2RBV5 119 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RAMP2O60895 175 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ESRRBO95718 433 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RHOCP08134 193 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DARSP14868 501 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MMP8P22894 467 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 STRA8Q7Z7C7 330 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LCA5Q86VQ0 697 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DAW1Q8N136 415 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DDI1Q8WTU0 396 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LPPQ93052 612 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TKTL2Q9H0I9 626 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 BCAS3Q9H6U6 928 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 IARS2Q9NSE4 1012 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 VPS28Q9UK41 221 aa10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-203ENST00000454498 C2orf81A6NN90 581 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PYGBP11216 843 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ENO3P13929 434 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CD52P31358 61 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RENBPP51606 427 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 AP2B1P63010 937 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 IFI35P80217 286 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 POU6F1Q14863 301 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MFN1Q8IWA4 741 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SHISA4Q96DD7 197 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZBTB10Q96DT7 871 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NTPCRQ9BSD7 190 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SNRNP25Q9BV90 132 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 WRAP73Q9P2S5 460 aaPredicted RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PCYOX1Q9UHG3 505 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CRLS1Q9UJA2 301 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ARFGEF2Q9Y6D5 1785 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SUPT3HB4E1H0 165 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CBX4O00257 560 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 O00370 1275 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 STK25O00506 426 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MAP2K7O14733 419 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SUPT3HO75486 399 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KLHL2O95198 593 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TRUB2O95900 331 aaKnown RBP10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 APOA4P06727 396 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MMP3P08254 477 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MYBL2P10244 700 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PEX19P40855 299 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RAD23BP54727 409 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 EPHB3P54753 998 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TBCCQ15814 346 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NBPF20Q3BBV1 942 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ARHGAP15Q53QZ3 475 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HSP90AA5PQ58FG0 334 aa10.34□□□□□ -0.75
CSGALNACT1-203ENST00000454498 C6orf10Q5SRN2 563 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms