RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 STC2O76061 302 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HLA-DRAP01903 254 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RARGP13631 454 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CD6P30203 668 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CORO1AP31146 461 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HOXD12P35452 270 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PPP3CCP48454 512 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NASPP49321 788 aaPredicted RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TPMTP51580 245 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SGSHP51688 502 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MFAP3P55082 362 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PKP1Q13835 747 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SURF1Q15526 300 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF394Q53GI3 561 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SOWAHCQ53LP3 525 aaPredicted RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KCNT1Q5JUK3 1230 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C1orf220Q5T0J3 134 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DCAF12L1Q5VU92 463 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CEP135Q66GS9 1140 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TMEM215Q68D42 235 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLC36A4Q6YBV0 504 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 Q6ZNB5 142 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 UNC13DQ70J99 1090 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SCD5Q86SK9 330 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TAS1R2Q8TE23 839 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 OTUB2Q96DC9 234 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MTG2Q9H4K7 406 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C6orf106Q9H6K1 298 aaPredicted RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GAREM1Q9H706 876 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CAAP1Q9H8G2 361 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 UPF2Q9HAU5 1272 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 APOBEC3GQ9HC16 384 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CYLDQ9NQC7 956 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TLR8Q9NR97 1041 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TOR4AQ9NXH8 423 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 IL37Q9NZH6 218 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EIF2B4Q9UI10 523 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 LSM7Q9UK45 103 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ATMQ13315 3056 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TULP2O00295 520 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIAA0391O15091 583 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STX6O43752 255 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TSPAN3O60637 253 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CBFA2T3O75081 653 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ASS1P00966 412 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NR3C1P04150 777 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EPHX1P07099 455 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SYPP08247 313 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CISD3P0C7P0 127 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRR29P0C7W0 189 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PDCP20941 246 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GCLMP48507 274 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CSNK1EP49674 416 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 COPAP53621 1224 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STK4Q13043 487 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF234Q14588 700 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STARD3Q14849 445 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KNOP1Q1ED39 458 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF423Q2M1K9 1284 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIF19Q2TAC6 998 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SNX30Q5VWJ9 437 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SERPINA13PQ6UXR4 307 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CCNI2Q6ZMN8 369 aaPredicted RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HTR3DQ70Z44 454 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ANKS1BQ7Z6G8 1248 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DENND1CQ8IV53 801 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZC3H3Q8IXZ2 948 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CEP76Q8TAP6 659 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 WFDC5Q8TCV5 224 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PARD3BQ8TEW8 1205 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ADAMTS14Q8WXS8 1223 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 OVCA2Q8WZ82 227 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CEP295NLQ96MC4 621 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DCBLD2Q96PD2 775 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 XPO6Q96QU8 1125 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CCDC86Q9H6F5 360 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MARK1Q9P0L2 795 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 USP36Q9P275 1121 aaKnown RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SCML2Q9UQR0 700 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PCDHB9Q9Y5E1 797 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms