RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MYBL1P10243 752 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 HARS2P49590 506 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLC18A3Q16572 532 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 ALKBH5Q6P6C2 394 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 ARCQ7LC44 396 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 OLIG1Q8TAK6 271 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 DQX1Q8TE96 717 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 PLD4Q96BZ4 506 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 SMOC2Q9H3U7 446 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 PARVAQ9NVD7 372 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 TMEM59LQ9UK28 342 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 STAP1Q9ULZ2 295 aa15.24■□□□□ 0.03
NCKIPSD-207ENST00000453349 DOCK8Q8NF50 2099 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 SIGLEC16A6NMB1 481 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 TRUB2O95900 331 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 MRE11P49959 708 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 TBX4P57082 545 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 GFPT1Q06210 699 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 NR1H3Q13133 447 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 RUNX3Q13761 415 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 TRIP4Q15650 581 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 DNAJC24Q6P3W2 148 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 RIN3Q8TB24 985 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 ADAM32Q8TC27 787 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 ANP32BQ92688 251 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 EDAQ92838 391 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 DNASE1L2Q92874 299 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 ATP2A3Q93084 1043 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 RNF34Q969K3 372 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 ZFYVE19Q96K21 471 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 FAM83CQ9BQN1 747 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 DDX23Q9BUQ8 820 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 LINC00597Q9H2U6 94 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 WNT16Q9UBV4 365 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 FBXL21Q9UKT6 434 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 TLR6Q9Y2C9 796 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 WNT6Q9Y6F9 365 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 BRWD1Q9NSI6 2320 aa15.23■□□□□ 0.03
NCKIPSD-207ENST00000453349 HELZP42694 1942 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 PI4K2BG5E9Z4 385 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 M0QYT0 321 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 MSI1O43347 362 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 F9P00740 461 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 PDGFRAP16234 1089 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 DESP17661 470 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 RRM1P23921 792 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 CORO1AP31146 461 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SULT1E1P49888 294 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 RING1Q06587 406 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 NNTQ13423 1086 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 ASTE1Q2TB18 679 aaPredicted RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLC25A52Q3SY17 297 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLC44A4Q53GD3 710 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 DCUN1D2Q6PH85 259 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 TAC4Q86UU9 113 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 DNAAF5Q86Y56 855 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 TMTC1Q8IUR5 882 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 ZNF653Q96CK0 615 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 FAM204AQ9H8W3 233 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 MRPL47Q9HD33 250 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 DDIT4Q9NX09 232 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 MYO1AQ9UBC5 1043 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 CNOT8Q9UFF9 292 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLC12A6Q9UHW9 1150 aa15.22■□□□□ 0.03
NCKIPSD-207ENST00000453349 SYNJ2BP-COX16A0A087WUM0 186 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 NFATC1O95644 943 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 SLC2A3P11169 496 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 ABCB4P21439 1286 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 SDC4P31431 198 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 CHKAP35790 457 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 GSDMDP57764 484 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 AMPD2Q01433 879 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 DEUP1Q05D60 604 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 SIGLEC14Q08ET2 396 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 NME3Q13232 169 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 EML3Q32P44 896 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 ITPRIPL2Q3MIP1 535 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 TRIM68Q6AZZ1 485 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 DENND1CQ8IV53 801 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 BBS7Q8IWZ6 715 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 CCDC170Q8IYT3 715 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 CPA6Q8N4T0 437 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 EMC1Q8N766 993 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 JOSD2Q8TAC2 188 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 RXFP2Q8WXD0 754 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 WBP2Q969T9 261 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 CFAP57Q96MR6 1250 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 NPY6RQ99463 290 aa15.21■□□□□ 0.03
NCKIPSD-207ENST00000453349 COX16Q9P0S2 106 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms