RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 DHX35Q9H5Z1 703 aaKnown RBP11.72□□□□□ -0.53
SYVN1-204ENST00000449943 PCDH18Q9HCL0 1135 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 RPL26L1Q9UNX3 145 aaKnown RBP11.72□□□□□ -0.53
SYVN1-204ENST00000449943 A0A087WZ62 844 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 MAP3K7O43318 606 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 CIB2O75838 187 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 SKIP12755 728 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 SESTD1Q86VW0 696 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 TTC1Q99614 292 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 EBF4Q9BQW3 602 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
SYVN1-204ENST00000449943 WWP1Q9H0M0 922 aa11.72□□□□□ -0.53
SYVN1-204ENST00000449943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 SLC15A5A6NIM6 579 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 SMIM24O75264 130 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 LYPLA1O75608 230 aaPredicted RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 TFE3P19532 575 aaPredicted RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 IL4RP24394 825 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 GBE1Q04446 702 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 C20orf27Q9GZN8 174 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 PLAC1Q9HBJ0 212 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 ADARB2Q9NS39 739 aaKnown RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
SYVN1-204ENST00000449943 GABRB2P47870 512 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 ACAP1Q15027 740 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 SHCBP1LQ9BZQ2 653 aa11.71□□□□□ -0.53
SYVN1-204ENST00000449943 PRR5-ARHGAP8B1AHC4 643 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 MAP3K13O43283 966 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 VTNP04004 478 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 CYP2F1P24903 491 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 RPL10AP62906 217 aaKnown RBP11.71□□□□□ -0.54
SYVN1-204ENST00000449943 ARHGAP8P85298 464 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 HSF5Q4G112 596 aaPredicted RBP11.71□□□□□ -0.54
SYVN1-204ENST00000449943 PMF1Q6P1K2 205 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 LBX2Q6XYB7 198 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 C7orf31Q8N865 590 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 MED10Q9BTT4 135 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 CEP41Q9BYV8 373 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 FAM49AQ9H0Q0 323 aaPredicted RBP11.71□□□□□ -0.54
SYVN1-204ENST00000449943 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.54
SYVN1-204ENST00000449943 CCDC189A1A4V9 331 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 GNAT1P11488 350 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 STX3Q13277 289 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 AMHR2Q16671 573 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 C6orf163Q5TEZ5 329 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SCUBE1Q8IWY4 988 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 C1QAP02745 245 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 UBTFL6P0CB48 400 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 C1orf146Q5VVC0 180 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 RIPOR1Q6ZS17 1223 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 GSDMBQ8TAX9 411 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 IL1RAPL1Q9NZN1 696 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 EME2A4GXA9 379 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 ARHGAP42A6NI28 874 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 TGM2P21980 687 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 KCNA4P22459 653 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 POU5F2Q8N7G0 328 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 C7orf26Q96N11 449 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 RNPEPQ9H4A4 650 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 LRCH1Q9Y2L9 728 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 HBS1LQ9Y450 684 aaKnown RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 WDR27A2RRH5 827 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 A6NJR5 290 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 USP1O94782 785 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 ENDOD1O94919 500 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SESN2P58004 480 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 PDK2Q15119 407 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SLC10A6Q3KNW5 377 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 BOLA3Q53S33 107 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 TMPRSS6Q8IU80 811 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
SYVN1-204ENST00000449943 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 CLMNQ96JQ2 1002 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SEPT10Q9P0V9 454 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 TAGLN3Q9UI15 199 aa11.7□□□□□ -0.54
SYVN1-204ENST00000449943 SNX9Q9Y5X1 595 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms