RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 TSPAN16Q9UKR8 245 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 HCN2Q9UL51 889 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 KIAA1257Q9ULG3 409 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 LAMA1P25391 3075 aa11.34□□□□□ -0.59
SRRT-205ENST00000449389 CHD8Q9HCK8 2581 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PMM2O15305 246 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PENKP01210 267 aaPredicted RBP11.33□□□□□ -0.6
SRRT-205ENST00000449389 KLKB1P03952 638 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 HMBSP08397 361 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 CISD3P0C7P0 127 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 SETSIPP0DME0 302 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 VDRP11473 427 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 GABRG2P18507 467 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 KCNA4P22459 653 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 CORO1AP31146 461 aaKnown RBP11.33□□□□□ -0.6
SRRT-205ENST00000449389 WASP42768 502 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 FMO5P49326 533 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PDE4CQ08493 712 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 CETN1Q12798 172 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 LRMPQ12912 555 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 FOXR2Q6PJQ5 311 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 TOGARAM2Q6ZUX3 1019 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 UBR7Q8N806 425 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PIGKQ92643 395 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 BHMTQ93088 406 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 PLD4Q96BZ4 506 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 GABRG3Q99928 467 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 ULBP1Q9BZM6 244 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 LRRC4Q9HBW1 653 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 OLA1Q9NTK5 396 aaKnown RBP11.33□□□□□ -0.6
SRRT-205ENST00000449389 PLK2Q9NYY3 685 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
SRRT-205ENST00000449389 FBXO10Q9UK96 956 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 MAN1B1Q9UKM7 699 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 ABCA7Q8IZY2 2146 aa11.33□□□□□ -0.6
SRRT-205ENST00000449389 CEP295Q9C0D2 2601 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 SLC12A8A0AV02 714 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 LNP1A1A4G5 178 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 BICDL2A1A5D9 508 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 TULP2O00295 520 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 O00370 1275 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 GFRA2O00451 464 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 P4HA2O15460 535 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 AP5Z1O43299 807 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 ZNF217O75362 1048 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 CYBBP04839 570 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 PAEPP09466 180 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 ADIGQ0VDE8 80 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 E2F5Q15329 346 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 FYB2Q5VWT5 728 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 LYSMD4Q5XG99 296 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 SLC36A4Q6YBV0 504 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 SYT12Q8IV01 421 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 TMEFF1Q8IYR6 380 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 SIX6OS1Q8N1H7 587 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 SCML4Q8N228 414 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 CPXM2Q8N436 756 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 IPO4Q8TEX9 1081 aaKnown RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 RNF139Q8WU17 664 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 KCTD13Q8WZ19 329 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 ACOX2Q99424 681 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 TMEM9BQ9NQ34 198 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 CALCOCO1Q9P1Z2 691 aa11.32□□□□□ -0.6
SRRT-205ENST00000449389 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
SRRT-205ENST00000449389 MYO18AQ92614 2054 aaKnown RBP11.31□□□□□ -0.6
SRRT-205ENST00000449389 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 NPC1O15118 1278 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 NDUFV2P19404 249 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 HOXD12P35452 270 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 PTGER3P43115 390 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 MFAP3P55082 362 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
SRRT-205ENST00000449389 LMAN2Q12907 356 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 MORC3Q14149 939 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 STARD3Q14849 445 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 STILQ15468 1287 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
SRRT-205ENST00000449389 KLHL10Q6JEL2 608 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 TMEM270Q6UE05 265 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 ARMCX6Q7L4S7 300 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 BHLHA9Q7RTU4 235 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 PPM1KQ8N3J5 372 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms