RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 FAM159BA6NKW6 160 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 A8MXQ7 604 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 ATXN1P54253 815 aaKnown RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 CDK16Q00536 496 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 CRYBG2Q8N1P7 616 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 PTCD3Q96EY7 689 aaKnown RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 TMEM120AQ9BXJ8 343 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 HCRTO43612 131 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 UGT1A9O60656 530 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 PEX11AO75192 247 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 ECM2O94769 699 aaPredicted RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 HAUS5O94927 633 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 CSH1P0DML2 217 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 CSH2P0DML3 217 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 SMPD1P17405 629 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 BCAT1P54687 386 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 MRPS5P82675 430 aaKnown RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 KCNT2Q6UVM3 1135 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 GSDMBQ8TAX9 411 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 KBTBD7Q8WVZ9 684 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 MTBPQ96DY7 904 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 CSPG4P5Q96PW8 444 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 KCTD15Q96SI1 283 aaPredicted RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 MAGEB5Q9BZ81 275 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 IQCGQ9H095 443 aaKnown RBP17.53■□□□□ 0.4
TOM1-210ENST00000449058 CXorf56Q9H5V9 222 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 RNPEPL1Q9HAU8 725 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 UGT1A7Q9HAW7 530 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 UGT1A10Q9HAW8 530 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 UGT1A8Q9HAW9 530 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 RNF181Q9P0P0 153 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 HES2Q9Y543 173 aa17.53■□□□□ 0.4
TOM1-210ENST00000449058 DIAPH2O60879 1101 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 GPR32O75388 356 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 GM2AP17900 193 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 SEMA5AQ13591 1074 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 DUSP28Q4G0W2 176 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 WASHC2DQ5SRD0 308 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 CATSPER4Q7RTX7 472 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 MPP5Q8N3R9 675 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 GCOM2Q9BZD3 368 aaPredicted RBP17.52■□□□□ 0.4
TOM1-210ENST00000449058 XAB2Q9HCS7 855 aaKnown RBP17.52■□□□□ 0.4
TOM1-210ENST00000449058 SETD4Q9NVD3 440 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 USP3Q9Y6I4 520 aa17.52■□□□□ 0.4
TOM1-210ENST00000449058 PIRO00625 290 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 STRNO43815 780 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 KRT38O76015 456 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 RPSAP08865 295 aaKnown RBP17.52■□□□□ 0.39
TOM1-210ENST00000449058 NEFHP12036 1026 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 CCDC130P13994 396 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 GLRA4Q5JXX5 417 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 NCBP2-AS2Q69YL0 99 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 TRMT10BQ6PF06 316 aaKnown RBP17.52■□□□□ 0.39
TOM1-210ENST00000449058 CCDC185Q8N715 623 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 C7orf31Q8N865 590 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 ZC3H15Q8WU90 426 aaKnown RBP17.52■□□□□ 0.39
TOM1-210ENST00000449058 RSRC1Q96IZ7 334 aaKnown RBP17.52■□□□□ 0.39
TOM1-210ENST00000449058 MIPEPQ99797 713 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 CDHR5Q9HBB8 845 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 ARL8BQ9NVJ2 186 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 DTLQ9NZJ0 730 aa17.52■□□□□ 0.39
TOM1-210ENST00000449058 NKX1-2Q9UD57 310 aaPredicted RBP17.52■□□□□ 0.39
TOM1-210ENST00000449058 HMX2A2RU54 273 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 ADORA2BP29275 332 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 SERPINB3P29508 390 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 DGKDQ16760 1214 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 FAM91A1Q658Y4 838 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 NOTUMQ6P988 496 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 TRIM42Q8IWZ5 723 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 C7orf26Q96N11 449 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 TRIM56Q9BRZ2 755 aaKnown RBP17.51■□□□□ 0.39
TOM1-210ENST00000449058 UBQLN1Q9UMX0 589 aaKnown RBP17.51■□□□□ 0.39
TOM1-210ENST00000449058 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 RRN3P2A6NIE6 340 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 CCDC22O60826 627 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 DGKIO75912 1065 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 RECQL4O94761 1208 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 LCP1P13796 627 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 GNAZP19086 355 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 CALB2P22676 271 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 ACADSBP45954 432 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 BMPR2Q13873 1038 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 KRT72Q14CN4 511 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
TOM1-210ENST00000449058 CYS1Q717R9 158 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 STRADAQ7RTN6 431 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.51■□□□□ 0.39
TOM1-210ENST00000449058 OXNAD1Q96HP4 312 aaPredicted RBP17.51■□□□□ 0.39
TOM1-210ENST00000449058 OLFM3Q96PB7 478 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 NXF3Q9H4D5 531 aaKnown RBP17.51■□□□□ 0.39
TOM1-210ENST00000449058 GDAP2Q9NXN4 497 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 SIRPGQ9P1W8 387 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 GINS2Q9Y248 185 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms