RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 SLC9A7Q96T83 725 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 CAPS2Q9BXY5 557 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 ROPN1BQ9BZX4 212 aaPredicted RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 ROPN1Q9HAT0 212 aaPredicted RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 SYNJ2BP-COX16A0A087WUM0 186 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 BCLAF3A2AJT9 711 aaKnown RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 OAZ2O95190 189 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 NCAM1P13591 858 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 GOT1P17174 413 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 GBE1Q04446 702 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 NME3Q13232 169 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 C6orf118Q5T5N4 469 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 ANKRD22Q5VYY1 191 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 PGAP3Q96FM1 320 aaPredicted RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 C9orf72Q96LT7 481 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 FAM193BQ96PV7 902 aaPredicted RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 WDR6Q9NNW5 1121 aaKnown RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 TMPRSS4Q9NRS4 437 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 COX16Q9P0S2 106 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 OGDHLQ9ULD0 1010 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 PRG3Q9Y2Y8 225 aaPredicted RBP18.38■□□□□ 0.53
LMNA-208ENST00000448611 PTPRDP23468 1912 aa18.38■□□□□ 0.53
LMNA-208ENST00000448611 TLDC2A0PJX2 215 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 RASGRF2O14827 1237 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 NR2C2P49116 596 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 SLC10A2Q12908 348 aaPredicted RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 TCTN1Q2MV58 587 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 NCBP2-AS2Q69YL0 99 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 SEPT8Q92599 483 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 MAP3K6O95382 1288 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 AMPD1P23109 780 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 RBL1P28749 1068 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 HPDP32754 393 aaPredicted RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 ARL4AP40617 200 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 XRCC4Q13426 336 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 AUHQ13825 339 aaKnown RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 TNFAIP8L3Q5GJ75 292 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 MFSD5Q6N075 450 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 C4orf50Q6ZRC1 276 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 FAM43BQ6ZT52 329 aaPredicted RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 SPATA2LQ8IUW3 424 aaPredicted RBP18.37■□□□□ 0.53
LMNA-208ENST00000448611 CRIPAKQ8N1N5 446 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 ADAM32Q8TC27 787 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 NTAN1Q96AB6 310 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 PHACTR1Q9C0D0 580 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 ETNK2Q9NVF9 386 aa18.37■□□□□ 0.53
LMNA-208ENST00000448611 SMIM23A6NLE4 172 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 SMAPO00193 183 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 RGS16O15492 202 aaPredicted RBP18.36■□□□□ 0.53
LMNA-208ENST00000448611 KCNN4O15554 427 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 PQBP1O60828 265 aaKnown RBP18.36■□□□□ 0.53
LMNA-208ENST00000448611 TCEA3O75764 348 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 OR4Q2P0C623 313 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 ADRA1BP35368 520 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 SLCO1A2P46721 670 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 AIF1P55008 147 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 GAD2Q05329 585 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 SCAPQ12770 1279 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 CENPUQ71F23 418 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 ARFGAP2Q8N6H7 521 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 RNF139Q8WU17 664 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 APBB2Q92870 758 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 ZCWPW1Q9H0M4 648 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 PRDM16Q9HAZ2 1276 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 ANLNQ9NQW6 1124 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 ARHGEF4Q9NR80 690 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 PATJQ8NI35 1801 aa18.36■□□□□ 0.53
LMNA-208ENST00000448611 TCRBV7S3A2A0A539 114 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 A6NNZ2 444 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 I6L893 689 aaPredicted RBP18.35■□□□□ 0.53
LMNA-208ENST00000448611 ALOX15BO15296 676 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TMEM63AO94886 807 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 ABHD2P08910 425 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 IRAK1P51617 712 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 FASTKD3Q14CZ7 662 aaKnown RBP18.35■□□□□ 0.53
LMNA-208ENST00000448611 LONRF1Q17RB8 773 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SKIDA1Q1XH10 827 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TUBB8Q3ZCM7 444 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SLC39A12Q504Y0 691 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 EFHC2Q5JST6 749 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
LMNA-208ENST00000448611 ABI1Q8IZP0 508 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TAB3Q8N5C8 712 aaPredicted RBP18.35■□□□□ 0.53
LMNA-208ENST00000448611 EDEM1Q92611 657 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 DTLQ9NZJ0 730 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 PAK5Q9P286 719 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SLC12A6Q9UHW9 1150 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 FBXW11Q9UKB1 542 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 H3BRJ5 948 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 GOLGA8MH3BSY2 632 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms